Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AL031577.2-201ENST00000404133 280 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 HMGN1P14-201ENST00000412459 517 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AL590135.1-201ENST00000422215 156 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AC019205.3-201ENST00000424573 156 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AL669831.1-202ENST00000428504 417 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AL596276.1-201ENST00000434465 418 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 GTF2IP13-201ENST00000438487 386 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AC016700.2-201ENST00000446011 156 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.34□□□□□ -2.19
CLN6Q9NWW5 RNU7-182P-201ENST00000459009 62 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AC015911.1-201ENST00000495111 156 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 YWHAEP4-201ENST00000505390 198 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AC119751.5-201ENST00000514077 770 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 SNORA31.17-201ENST00000516953 127 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AC087441.2-201ENST00000529141 262 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AC008015.1-201ENST00000555505 465 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.34□□□□□ -2.19
CLN6Q9NWW5 BNIP3P16-201ENST00000589779 534 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 MIR98-201ENST00000606724 119 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 MIR8074-201ENST00000615081 81 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 AC079248.2-201ENST00000623779 326 ntBASIC1.34□□□□□ -2.19
CLN6Q9NWW5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.34□□□□□ -2.2
CLN6Q9NWW5 AP000560.1-201ENST00000624150 1937 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 RNU6-74P-201ENST00000384235 107 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 SNORA40.3-201ENST00000390964 122 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 RNU4-46P-201ENST00000410818 138 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AC010975.2-201ENST00000427781 588 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 RPL31P35-201ENST00000431058 377 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AC244670.1-201ENST00000436879 112 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 RPS29P15-201ENST00000458329 171 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AC010409.1-201ENST00000487382 476 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AC114801.2-201ENST00000503825 781 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 MTCO3P7-201ENST00000510008 774 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 SNORD27.1-201ENST00000516319 72 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 MIR4775-201ENST00000581168 75 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AC008945.2-201ENST00000606056 604 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.33□□□□□ -2.2
CLN6Q9NWW5 AL603839.4-201ENST00000624658 1005 ntBASIC1.33□□□□□ -2.2
CLN6Q9NWW5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLN6Q9NWW5 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.32□□□□□ -2.2
CLN6Q9NWW5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
CLN6Q9NWW5 RNU6-428P-201ENST00000362942 107 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 RNU6-1097P-201ENST00000363586 107 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 RNU6-553P-201ENST00000364047 96 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 RNU6-108P-201ENST00000365558 107 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 RNU6-1029P-201ENST00000384109 107 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 MIR504-201ENST00000385065 83 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 MTCO3P41-201ENST00000414801 328 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC123900.1-201ENST00000420390 96 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC009961.2-201ENST00000435771 251 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AL033528.1-201ENST00000453780 140 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 RNU1-131P-201ENST00000458943 161 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC005908.1-201ENST00000468701 347 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 TRBV12-1-201ENST00000479785 344 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC025465.3-201ENST00000510570 311 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 MTND1P22-201ENST00000510572 951 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 RNU6-415P-201ENST00000516252 97 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 SNORA25.15-201ENST00000516487 89 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 RNU6-759P-201ENST00000516740 103 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AP003072.2-201ENST00000527756 676 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.32□□□□□ -2.2
CLN6Q9NWW5 ZNF321P-202ENST00000550843 495 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.32□□□□□ -2.2
CLN6Q9NWW5 SUB1P4-201ENST00000566062 339 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC109446.1-201ENST00000566172 220 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC091805.2-201ENST00000603848 235 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 Z84480.1-201ENST00000605131 311 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC006566.1-201ENST00000608943 513 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC122133.1-201ENST00000613964 233 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AP001506.1-201ENST00000615444 211 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC022418.1-201ENST00000624118 445 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.32□□□□□ -2.2
CLN6Q9NWW5 AC241585.2-209ENST00000638217 143 ntBASIC1.32□□□□□ -2.2
CLN6Q9NWW5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
CLN6Q9NWW5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CLN6Q9NWW5 RNU6-438P-201ENST00000365561 103 ntBASIC1.31□□□□□ -2.2
CLN6Q9NWW5 Y_RNA.500-201ENST00000384466 111 ntBASIC1.31□□□□□ -2.2
CLN6Q9NWW5 MIR1-2-201ENST00000384961 85 ntBASIC1.31□□□□□ -2.2
CLN6Q9NWW5 MTND3P17-201ENST00000416968 344 ntBASIC1.31□□□□□ -2.2
CLN6Q9NWW5 AL357134.1-201ENST00000445848 426 ntBASIC1.31□□□□□ -2.2
CLN6Q9NWW5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CLN6Q9NWW5 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.31□□□□□ -2.2
CLN6Q9NWW5 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms