Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU2-3P-201ENST00000410144 191 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-607P-201ENST00000411283 108 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC010099.3-201ENST00000423896 409 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC073614.1-201ENST00000438690 650 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RAP1BP2-201ENST00000478270 544 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC108729.3-201ENST00000513484 108 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 FABP5P5-201ENST00000515537 406 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-377P-201ENST00000515965 102 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNVU1-2-201ENST00000516326 135 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-1178P-201ENST00000516674 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AP003033.1-201ENST00000527244 415 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC087883.1-201ENST00000551882 391 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 TRAV32-201ENST00000553993 340 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 MIR4422-201ENST00000581938 83 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC098848.2-201ENST00000588023 330 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC234772.3-201ENST00000602277 528 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC090578.1-201ENST00000604955 591 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-6P-201ENST00000606623 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC104073.3-201ENST00000610942 955 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC008250.2-201ENST00000615261 205 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC091304.6-201ENST00000619761 202 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC138649.3-201ENST00000622154 254 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 CBX3P1-201ENST00000325243 554 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 RNU6-661P-201ENST00000362409 107 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 SNORA62.1-201ENST00000364287 154 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 RNU6-203P-201ENST00000384038 104 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 RNU6-195P-201ENST00000411352 109 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 CYCSP33-201ENST00000414485 327 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 ISCA1P6-201ENST00000427740 390 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 MTND1P30-201ENST00000441241 901 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 MTND2P4-201ENST00000445034 1004 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 GAPDHP17-201ENST00000449858 1001 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 RNU1-123P-201ENST00000458950 160 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 MTND3P5-201ENST00000512798 333 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AP005597.4-201ENST00000526762 229 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AC115990.1-201ENST00000526957 301 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AL161670.1-201ENST00000554348 137 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AL050303.3-201ENST00000613704 284 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 AL590240.4-201ENST00000616908 390 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 U4.7-201ENST00000638126 106 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
TREX1Q9NSU2 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 RNA5SP493-201ENST00000364115 91 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 Y_RNA.324-201ENST00000365165 102 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 SNORA48.1-201ENST00000390879 135 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 SNORA12-201ENST00000391162 147 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AL357139.1-201ENST00000407792 426 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 RNU6-293P-201ENST00000411259 106 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.32□□□□□ -2.2
TREX1Q9NSU2 RPL23AP36-201ENST00000413895 458 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.32□□□□□ -2.2
TREX1Q9NSU2 SDAD1P3-201ENST00000427380 333 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AL035666.1-201ENST00000446195 348 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC145146.1-201ENST00000496370 254 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC005178.1-201ENST00000508392 440 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC104136.1-201ENST00000512969 394 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 RNA5SP490-201ENST00000517141 136 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC090572.1-201ENST00000519251 160 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC090616.2-202ENST00000584248 222 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.32□□□□□ -2.2
TREX1Q9NSU2 AC010900.2-201ENST00000604508 210 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 snoU13.31-201ENST00000607291 104 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 MIR8074-201ENST00000615081 81 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 Z69720.2-201ENST00000624755 279 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.32□□□□□ -2.2
TREX1Q9NSU2 MTND4P4-201ENST00000439033 1366 ntBASIC1.32□□□□□ -2.2
TREX1Q9NSU2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.31□□□□□ -2.2
TREX1Q9NSU2 MTND5P17-201ENST00000418405 1603 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 RNU6-105P-201ENST00000363909 104 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 RNU6-550P-201ENST00000391057 101 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 RPS3AP3-201ENST00000411933 242 ntBASIC1.31□□□□□ -2.2
TREX1Q9NSU2 NCOR1P3-201ENST00000420479 303 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms