Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC067942.3-201ENST00000512025 362 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC011406.1-201ENST00000512440 370 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 SNORA25.15-201ENST00000516487 89 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 RNU1-92P-201ENST00000517017 135 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 SNORA70.22-201ENST00000517160 124 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 EIF4A1P12-201ENST00000551910 141 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 TPRKBP2-201ENST00000565969 475 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MIR4709-201ENST00000577272 72 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MIR3923-201ENST00000579521 83 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC078795.3-201ENST00000602913 472 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AL021707.7-201ENST00000607991 416 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC097478.2-201ENST00000610572 514 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MIR6820-201ENST00000611508 62 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MIR8081-201ENST00000611533 95 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC104010.1-201ENST00000616889 150 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC012314.7-201ENST00000619693 93 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AL133216.2-202ENST00000634512 349 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 AC110994.2-201ENST00000635481 492 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 MTND4P14-201ENST00000435799 1354 ntBASIC0.44□□□□□ -2.34
CDC42SE1Q9NRR8 RNU4-79P-201ENST00000362764 141 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 RNU4-13P-201ENST00000364019 141 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 RNU4-68P-201ENST00000364314 141 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-336P-201ENST00000364891 107 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 RNA5SP259-201ENST00000365541 109 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 MIR608-201ENST00000384820 100 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 RNU2-39P-201ENST00000410604 198 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-293P-201ENST00000411259 106 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 COX6CP10-201ENST00000416832 224 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 MED13P1-201ENST00000428342 171 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 MTND1P20-201ENST00000430341 950 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AL133396.1-201ENST00000432048 687 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AC002429.1-201ENST00000437672 148 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 RPS26P45-201ENST00000471748 340 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 TRBV12-1-201ENST00000479785 344 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 RNU5F-4P-201ENST00000516581 114 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 RNA5SP168-201ENST00000516642 112 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AP001004.1-201ENST00000582468 324 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 MIR3660-201ENST00000584845 100 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AC022432.1-201ENST00000595739 310 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 VN1R107P-201ENST00000601784 209 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AC069431.2-201ENST00000604149 1099 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AC073413.2-201ENST00000604332 360 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AC105148.1-201ENST00000604961 409 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 SNORD114-21-201ENST00000606412 72 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AC009994.1-201ENST00000606889 253 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 BX323046.1-201ENST00000610145 535 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AL139418.1-201ENST00000613613 177 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 AC241585.2-209ENST00000638217 143 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.43□□□□□ -2.34
CDC42SE1Q9NRR8 Y_RNA.363-201ENST00000365529 113 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-877P-201ENST00000383868 107 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-809P-201ENST00000384461 107 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 RPS29P13-201ENST00000402041 169 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-733P-201ENST00000410759 104 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-1054P-201ENST00000411293 104 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 C1DP2-201ENST00000418167 426 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AC011233.1-201ENST00000422812 283 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AC007283.2-201ENST00000424739 197 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 HSFY7P-201ENST00000432672 318 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 SNAP23P1-201ENST00000433229 246 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 RPL37P21-201ENST00000435890 276 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 HSFY8P-201ENST00000437934 318 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 C1DP4-201ENST00000455429 424 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 SNRPFP4-201ENST00000456366 242 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AC117522.1-201ENST00000509821 380 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-351P-201ENST00000516097 100 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-467P-201ENST00000517027 110 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AP003181.2-201ENST00000528941 181 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 MIR5695-201ENST00000579717 85 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AP005136.1-201ENST00000579765 429 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 RPL17P51-201ENST00000605218 238 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AC021506.2-201ENST00000612354 169 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AC005520.5-201ENST00000613926 164 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 AL138960.2-201ENST00000625145 535 ntBASIC0.42□□□□□ -2.34
CDC42SE1Q9NRR8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 BX322639.1-202ENST00000423987 2213 ntBASIC0.41□□□□□ -2.34
CDC42SE1Q9NRR8 RNU6-37P-201ENST00000362692 107 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms