Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 snoU13.30-201ENST00000458951 104 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 RNU4-71P-201ENST00000516258 113 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 SCARNA24.2-201ENST00000516968 130 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 AL137100.2-201ENST00000555786 315 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 CYCSP39-201ENST00000565821 309 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 MIR4738-201ENST00000579134 87 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 MIR4474-201ENST00000579189 78 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 AL033523.1-201ENST00000605153 153 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 AC073657.2-201ENST00000605661 303 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 FTX_2.1-201ENST00000618816 94 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 AC022149.2-201ENST00000621061 203 ntBASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PDLIM7Q9NR12 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDLIM7Q9NR12 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDLIM7Q9NR12 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDLIM7Q9NR12 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PDLIM7Q9NR12 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AC006504.1-201ENST00000562493 3666 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 RNU6-1266P-201ENST00000362794 105 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 Y_RNA.150-201ENST00000363562 102 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 Y_RNA.269-201ENST00000364685 89 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 RNU6-140P-201ENST00000384566 108 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 Y_RNA.581-201ENST00000391017 97 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AL357075.1-201ENST00000404107 726 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 U3.37-201ENST00000408528 213 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AC124916.1-201ENST00000444020 547 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 RPS23P5-201ENST00000495419 428 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 RNU6-1012P-201ENST00000516606 109 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 SNORA43.2-201ENST00000516652 128 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 RNU6-1183P-201ENST00000517054 60 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 MIR4659A-201ENST00000580269 81 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 MIR4672-201ENST00000583126 81 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 MIR4276-201ENST00000584832 70 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 BX284668.6-201ENST00000606899 438 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AC004792.1-201ENST00000614523 137 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AL138880.2-201ENST00000616214 239 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 AC241585.2-209ENST00000638217 143 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 Z83843.1-201ENST00000604070 3685 ntBASIC3.83□□□□□ -1.8
PDLIM7Q9NR12 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 RNU6-1301P-201ENST00000362724 104 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 Z98749.2-208ENST00000381646 500 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 RNU6-937P-201ENST00000384325 106 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 SNORD78.2-201ENST00000391076 69 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 AL512844.2-201ENST00000433990 593 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 AC009296.1-201ENST00000443146 155 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 RPS26P21-201ENST00000475397 348 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 RPL23AP75-201ENST00000491601 451 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 RPL23AP49-201ENST00000492925 468 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 AC020914.4-201ENST00000597690 277 ntBASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PDLIM7Q9NR12 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 SNORD113-8-201ENST00000363497 74 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 RNU6-968P-201ENST00000384076 107 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 RNU6-301P-201ENST00000384277 107 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 RN7SKP284-201ENST00000411002 343 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 AC092047.1-201ENST00000424997 240 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 AC025750.2-201ENST00000442609 450 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 AL353705.4-201ENST00000449661 238 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 AC006445.1-201ENST00000491925 405 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 RNU6-703P-201ENST00000516946 107 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 AC024153.1-201ENST00000603103 365 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 SCARNA4-201ENST00000629045 128 ntBASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM7Q9NR12 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 587.9 ms