Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 TPTEP1-208ENST00000636884 213 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
DDX4Q9NQI0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DDX4Q9NQI0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AC135776.4-201ENST00000624300 1904 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 MIR21-201ENST00000362134 72 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 Y_RNA.263-201ENST00000364659 114 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 FTH1P15-201ENST00000406984 280 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 RNU2-41P-201ENST00000410991 178 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 RNU6-293P-201ENST00000411259 106 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.76□□□□□ -1.97
DDX4Q9NQI0 DPH3P2-201ENST00000422618 250 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 SUMO1P4-201ENST00000429430 302 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX4Q9NQI0 MTND1P11-201ENST00000456661 876 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 RNU6-1037P-201ENST00000459571 107 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 MED28P2-201ENST00000475771 317 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AC103851.1-201ENST00000506833 274 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 MTCYBP40-201ENST00000509390 1135 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX4Q9NQI0 RNU5F-8P-201ENST00000515941 111 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 Y_RNA.691-201ENST00000516611 103 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 RNU6-1088P-201ENST00000516850 104 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 RNA5SP454-201ENST00000517231 127 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 IGKV3-31-201ENST00000523109 329 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.76□□□□□ -1.97
DDX4Q9NQI0 MIR5007-201ENST00000583098 95 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AL391813.1-201ENST00000603098 260 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AC091152.3-201ENST00000604227 325 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 ELOCP5-201ENST00000604924 333 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AC009994.1-201ENST00000606889 253 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AC069234.5-201ENST00000611056 416 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 AC011890.2-201ENST00000613393 294 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 Y_RNA.804-201ENST00000615262 101 ntBASIC2.76□□□□□ -1.97
DDX4Q9NQI0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
DDX4Q9NQI0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
DDX4Q9NQI0 MAPK10-266ENST00000641066 6555 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 RNU6-858P-201ENST00000362436 107 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 Y_RNA.70-201ENST00000362886 110 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 RNU6-487P-201ENST00000365430 104 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 SNORD73A-201ENST00000386062 65 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AL356432.1-201ENST00000405809 419 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.75□□□□□ -1.97
DDX4Q9NQI0 RPS15AP28-201ENST00000435088 386 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AL445687.1-201ENST00000439946 251 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AC096638.1-201ENST00000444678 216 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 OSTCP8-201ENST00000445117 448 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AC130509.1-201ENST00000464158 433 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.75□□□□□ -1.97
DDX4Q9NQI0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 RNU6-273P-201ENST00000516937 96 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 GLYCAM1-201ENST00000546596 285 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX4Q9NQI0 MIR4790-201ENST00000577799 79 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AC023043.3-201ENST00000593113 385 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AC243960.4-201ENST00000600532 288 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AL670379.10-201ENST00000604330 253 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AL670379.9-201ENST00000605428 253 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 RNU6-91P-201ENST00000607774 107 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AC104237.2-201ENST00000612456 443 ntBASIC2.75□□□□□ -1.97
DDX4Q9NQI0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
DDX4Q9NQI0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 RNU6-827P-201ENST00000365553 106 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 SNORD116-20-201ENST00000384529 92 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 MIR147B-201ENST00000390185 80 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 RPS12P2-201ENST00000439728 269 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 MTND1P17-201ENST00000448961 204 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 AC107399.1-201ENST00000451226 265 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 AK3P2-201ENST00000507976 429 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 AC092436.3-201ENST00000511788 257 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 RNU6-507P-201ENST00000516045 100 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 Y_RNA.682-201ENST00000516457 100 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 AP005639.2-201ENST00000527592 928 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 ELOCP31-201ENST00000540463 467 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 BNIP3P16-201ENST00000589779 534 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 MIR7843-201ENST00000622274 79 ntBASIC2.74□□□□□ -1.97
DDX4Q9NQI0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX4Q9NQI0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
DDX4Q9NQI0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.73□□□□□ -1.97
DDX4Q9NQI0 RNU6-527P-201ENST00000363425 104 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 Y_RNA.184-201ENST00000363884 108 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 RNU6-105P-201ENST00000363909 104 ntBASIC2.73□□□□□ -1.97
DDX4Q9NQI0 RNU6-461P-201ENST00000364195 107 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms