Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SNORA25.10-201ENST00000515926 124 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 MIR5701-3-201ENST00000578890 82 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 MIR4298-201ENST00000584380 73 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 MIR5701-1-201ENST00000585138 82 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.46□□□□□ -1.86
VTA1Q9NP79 AC022432.1-201ENST00000595739 310 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 AC005014.2-201ENST00000607795 599 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 AC107294.3-201ENST00000609211 526 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 MIR5701-2-201ENST00000615634 82 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 HMGB1P24-202ENST00000615653 685 ntBASIC3.46□□□□□ -1.86
VTA1Q9NP79 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VTA1Q9NP79 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.46□□□□□ -1.86
VTA1Q9NP79 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTA1Q9NP79 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTA1Q9NP79 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTA1Q9NP79 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 RNU4-9P-201ENST00000364951 139 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 RNU6-1286P-201ENST00000383871 107 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 RNA5SP293-201ENST00000410527 113 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 AC007098.1-201ENST00000420122 367 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 PMCHL1-202ENST00000423102 261 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 AC022018.1-201ENST00000430685 241 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 FO393415.2-201ENST00000480085 343 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 RPS27P26-201ENST00000494583 239 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 RNU6-699P-201ENST00000517081 110 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 RNA5SP380-201ENST00000517190 98 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 AL590705.4-201ENST00000532209 134 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 AC104581.2-201ENST00000572227 430 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 RPS15AP11-201ENST00000594193 385 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 PART1_1.1-201ENST00000611761 217 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 AC083806.3-201ENST00000614016 455 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 AC073476.4-201ENST00000628409 72 ntBASIC3.45□□□□□ -1.86
VTA1Q9NP79 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
VTA1Q9NP79 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTA1Q9NP79 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTA1Q9NP79 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VTA1Q9NP79 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VTA1Q9NP79 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VTA1Q9NP79 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VTA1Q9NP79 SNORD114-19-201ENST00000363072 75 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 RNU6-805P-201ENST00000365643 106 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 Y_RNA.533-201ENST00000384596 114 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 MIR625-201ENST00000385047 85 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 RNU2-23P-201ENST00000410545 195 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 AC008267.5-201ENST00000424928 265 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 RPL21P40-201ENST00000428586 483 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.44□□□□□ -1.86
VTA1Q9NP79 AL031659.1-201ENST00000447075 539 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 RPL39P29-201ENST00000447779 157 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 RNU6-475P-201ENST00000516073 104 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 SCARNA15.1-201ENST00000516384 125 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 RNU6-567P-201ENST00000516746 107 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 RN7SKP295-201ENST00000517264 153 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 AC091144.1-201ENST00000519573 138 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 AC144568.1-201ENST00000520139 137 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 GNAI2P1-201ENST00000541815 315 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 AC060766.3-201ENST00000591442 263 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.44□□□□□ -1.86
VTA1Q9NP79 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VTA1Q9NP79 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VTA1Q9NP79 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.44□□□□□ -1.86
VTA1Q9NP79 AC233981.2-201ENST00000611524 1614 ntBASIC3.44□□□□□ -1.86
VTA1Q9NP79 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VTA1Q9NP79 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 SNORA33.2-201ENST00000365413 134 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 RNU6-968P-201ENST00000384076 107 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 RNU6-1032P-201ENST00000384100 107 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 AC010401.1-201ENST00000463867 348 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 AC117440.1-201ENST00000474107 571 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 RPS29P26-201ENST00000477483 171 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 RPL22P13-201ENST00000493291 347 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 AC083906.5-201ENST00000503722 328 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 RNU7-175P-201ENST00000515915 61 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 AC021231.3-201ENST00000558497 370 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 AL158827.2-201ENST00000602494 330 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 AC006023.1-201ENST00000603944 259 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 SCARNA4-201ENST00000629045 128 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 AL691447.3-201ENST00000635020 330 ntBASIC3.43□□□□□ -1.86
VTA1Q9NP79 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VTA1Q9NP79 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.43□□□□□ -1.86
VTA1Q9NP79 Y_RNA.80-201ENST00000362996 102 ntBASIC3.42□□□□□ -1.86
VTA1Q9NP79 RNU6-1285P-201ENST00000363480 105 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms