Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC005300.1-201ENST00000428401 373 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.84□□□□□ -1.79
SSU72Q9NP77 snoU13.1-201ENST00000459157 104 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 Y_RNA.637-201ENST00000459424 114 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.84□□□□□ -1.79
SSU72Q9NP77 CYCSP23-201ENST00000519781 313 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.84□□□□□ -1.79
SSU72Q9NP77 NACAP3-201ENST00000552100 481 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 AC044860.2-201ENST00000561005 179 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 MIR4644-201ENST00000579929 84 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 AL133393.1-201ENST00000603277 287 ntBASIC3.84□□□□□ -1.79
SSU72Q9NP77 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SSU72Q9NP77 AC006504.1-201ENST00000562493 3666 ntBASIC3.84□□□□□ -1.8
SSU72Q9NP77 AC092593.1-201ENST00000515413 1815 ntBASIC3.84□□□□□ -1.8
SSU72Q9NP77 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSU72Q9NP77 AC010300.1-201ENST00000600671 5134 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSU72Q9NP77 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSU72Q9NP77 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.83□□□□□ -1.8
SSU72Q9NP77 AC126755.2-208ENST00000327792 462 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 AC138969.1-213ENST00000331436 462 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 SNORA72.2-201ENST00000365028 127 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 SNORD116-18-201ENST00000383961 92 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 RNU6-793P-201ENST00000384233 104 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 MIR3074-201ENST00000384885 81 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 PTMAP5-201ENST00000393073 333 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 AL512633.1-201ENST00000399931 655 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 RPS16P5-201ENST00000406501 404 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 RNU2-54P-201ENST00000410299 190 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.83□□□□□ -1.8
SSU72Q9NP77 RPL26P9-201ENST00000457466 433 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 RN7SL610P-201ENST00000463845 291 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.83□□□□□ -1.8
SSU72Q9NP77 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSU72Q9NP77 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.83□□□□□ -1.8
SSU72Q9NP77 MIR4480-201ENST00000582492 71 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 RMST_8.1-201ENST00000610287 165 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 MIR8059-201ENST00000620427 81 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 AC011944.2-201ENST00000624440 683 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 AC099654.7-201ENST00000635788 2127 ntBASIC3.83□□□□□ -1.8
SSU72Q9NP77 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.83□□□□□ -1.8
SSU72Q9NP77 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSU72Q9NP77 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSU72Q9NP77 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SSU72Q9NP77 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 RNA5SP189-201ENST00000364920 115 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.82□□□□□ -1.8
SSU72Q9NP77 MIR186-201ENST00000384988 86 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 AL590139.1-201ENST00000416267 400 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 AC009963.1-201ENST00000417265 157 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 AL049830.2-201ENST00000480072 201 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 AC140059.1-201ENST00000489238 361 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 RNU6-155P-201ENST00000516347 100 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.82□□□□□ -1.8
SSU72Q9NP77 MIR4425-201ENST00000580572 84 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 MIR4715-201ENST00000584117 79 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 AC100827.5-201ENST00000615883 426 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.82□□□□□ -1.8
SSU72Q9NP77 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSU72Q9NP77 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.82□□□□□ -1.8
SSU72Q9NP77 AC068700.1-201ENST00000565862 3754 ntBASIC3.82□□□□□ -1.8
SSU72Q9NP77 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.82□□□□□ -1.8
SSU72Q9NP77 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSU72Q9NP77 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSU72Q9NP77 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSU72Q9NP77 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.81□□□□□ -1.8
SSU72Q9NP77 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.81□□□□□ -1.8
SSU72Q9NP77 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSU72Q9NP77 RNU6-50P-201ENST00000362356 103 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 RNA5SP447-201ENST00000363749 119 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 Y_RNA.412-201ENST00000384001 104 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 RNU6-245P-201ENST00000384020 107 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 RNU6-1117P-201ENST00000384525 104 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 RNU6-959P-201ENST00000384671 107 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 MIR550A3-201ENST00000390735 95 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.81□□□□□ -1.8
SSU72Q9NP77 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.81□□□□□ -1.8
SSU72Q9NP77 AC091167.4-201ENST00000605079 184 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 AC005520.5-201ENST00000613926 164 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 MIR6730-201ENST00000622213 67 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSU72Q9NP77 AC106871.1-201ENST00000568324 3102 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 AL133383.2-201ENST00000622958 2336 ntBASIC3.81□□□□□ -1.8
SSU72Q9NP77 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
SSU72Q9NP77 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSU72Q9NP77 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.8□□□□□ -1.8
SSU72Q9NP77 MIR383-201ENST00000362257 73 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 RNU6-727P-201ENST00000363592 107 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 RNU6-454P-201ENST00000364292 107 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 Y_RNA.238-201ENST00000364441 102 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 Y_RNA.568-201ENST00000384742 113 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 RPS26P8-201ENST00000393490 348 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 RNU2-2P-201ENST00000410396 191 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 SNORA57.3-201ENST00000411095 141 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 AC023141.4-201ENST00000412031 328 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 BTF3P11-201ENST00000426582 477 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 AC006989.1-201ENST00000427212 131 ntBASIC3.8□□□□□ -1.8
SSU72Q9NP77 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms