Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD8Q9HCK8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD8Q9HCK8 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 RNY4-201ENST00000516507 96 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 ZNF705CP-201ENST00000530515 889 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 AC112220.2-201ENST00000605513 533 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 AC117490.2-201ENST00000610042 594 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.01□□□□□ -2.41
CHD8Q9HCK8 MIR411-201ENST00000362239 96 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 Y_RNA.180-201ENST00000363867 113 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 RNA5SP128-201ENST00000365305 116 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 USP9YP19-201ENST00000412165 485 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 USP9YP13-201ENST00000417797 480 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD8Q9HCK8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD8Q9HCK8 RAC1P8-201ENST00000427086 527 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.01□□□□□ -2.41
CHD8Q9HCK8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.01□□□□□ -2.41
CHD8Q9HCK8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.01□□□□□ -2.41
CHD8Q9HCK8 AP001324.2-201ENST00000461163 319 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 AC114982.2-201ENST00000461396 358 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.01□□□□□ -2.41
CHD8Q9HCK8 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 MIR6516-201ENST00000630554 81 ntBASIC0.01□□□□□ -2.41
CHD8Q9HCK8 snoU2_19.1-201ENST00000362361 80 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 Y_RNA.256-201ENST00000364594 104 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 RNY1P8-201ENST00000383970 114 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AL161935.2-201ENST00000414627 60 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 RAB28P5-201ENST00000427490 651 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AL669831.1-202ENST00000428504 417 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0□□□□□ -2.41
CHD8Q9HCK8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0□□□□□ -2.41
CHD8Q9HCK8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0□□□□□ -2.41
CHD8Q9HCK8 HMGN3P1-201ENST00000453847 193 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 SNORA31.2-201ENST00000516019 134 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 SCARNA17-201ENST00000516183 144 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 SNORA70.22-201ENST00000517160 124 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0□□□□□ -2.41
CHD8Q9HCK8 MIR5094-201ENST00000578766 85 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0□□□□□ -2.41
CHD8Q9HCK8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 U3.9-201ENST00000363823 204 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 RNU6-1335P-201ENST00000365426 107 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 Y_RNA.416-201ENST00000384014 113 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 MIR196A2-201ENST00000385189 110 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 RNU2-47P-201ENST00000410649 186 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 RPS15AP10-201ENST00000432472 382 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 RAB11AP1-201ENST00000442978 646 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AL050341.1-201ENST00000447743 313 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0□□□□□ -2.41
CHD8Q9HCK8 OR6C5P-201ENST00000452388 923 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0□□□□□ -2.41
CHD8Q9HCK8 AC048334.1-201ENST00000477975 159 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AC010469.2-201ENST00000496412 480 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AC114981.1-201ENST00000503897 678 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AC093534.1-201ENST00000504977 132 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0□□□□□ -2.41
CHD8Q9HCK8 RNU6-1092P-201ENST00000516955 87 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 RN7SKP258-201ENST00000517151 304 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 MIR3664-201ENST00000579074 99 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AL357094.1-201ENST00000603845 844 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AC091152.3-201ENST00000604227 325 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 KATNBL1P5-201ENST00000605015 517 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AL353149.1-201ENST00000610667 244 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 MIR8064-201ENST00000612863 90 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 AC068647.2-201ENST00000637380 353 ntBASIC0□□□□□ -2.41
CHD8Q9HCK8 MIR103A1-201ENST00000362165 78 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 RNU6-944P-201ENST00000364023 107 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 RNU6-657P-201ENST00000383904 107 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 RNU6-878P-201ENST00000384578 110 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AL451054.2-201ENST00000420896 202 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AC063976.4-201ENST00000421971 163 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0□□□□□ -2.41
CHD8Q9HCK8 GPM6BP2-201ENST00000432046 144 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 GPM6BP1-201ENST00000446387 144 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AL353752.1-201ENST00000454946 260 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AC011005.2-201ENST00000487324 359 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0□□□□□ -2.41
CHD8Q9HCK8 SNORA68.3-201ENST00000515906 83 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 MIR3115-201ENST00000577915 68 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0□□□□□ -2.41
CHD8Q9HCK8 AC091057.3-201ENST00000602684 733 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AL513534.2-201ENST00000603836 250 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 Z98751.3-201ENST00000604447 521 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AC242628.1-201ENST00000606810 391 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 AC093648.1-201ENST00000623546 606 ntBASIC-0□□□□□ -2.41
CHD8Q9HCK8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 RNU6-140P-201ENST00000384566 108 ntBASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 HMGB1P30-201ENST00000492455 606 ntBASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 RNA5SP168-201ENST00000516642 112 ntBASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 RNA5SP291-201ENST00000517222 105 ntBASIC-0.01□□□□□ -2.41
CHD8Q9HCK8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms