Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 SNORA25B-201ENST00000365507 128 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 SNORA75-201ENST00000384158 137 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 RNU6-606P-201ENST00000384721 111 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 SNORD70.1-201ENST00000391007 85 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 BTF3P4-201ENST00000418852 495 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 MTCO1P19-201ENST00000443487 500 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 AL121594.1-201ENST00000475906 575 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 MTCO3P7-201ENST00000510008 774 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 RNU6-586P-201ENST00000517265 104 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 HSBP1P1-201ENST00000555205 166 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 AC008752.3-201ENST00000588113 712 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 AC123912.5-201ENST00000605470 343 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 MIR502-201ENST00000606349 86 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 AC008536.2-201ENST00000607284 349 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 AL773524.1-201ENST00000614065 229 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 uc_338.11-201ENST00000619132 160 ntBASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 RNU6-655P-201ENST00000362858 107 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 Y_RNA.359-201ENST00000365498 102 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 MIR544A-201ENST00000384855 91 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 RNU4-62P-201ENST00000410125 130 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 BTF3L4P1-201ENST00000413813 468 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 AL353752.1-201ENST00000454946 260 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 AL122001.1-201ENST00000457027 370 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 SNRPGP7-201ENST00000469016 106 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 RNU6-1053P-201ENST00000515930 101 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 AC006362.1-201ENST00000567392 174 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 MIR4255-201ENST00000579351 72 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 MIR4303-201ENST00000581299 66 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 AL031274.2-201ENST00000599419 203 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 ELOCP5-201ENST00000604924 333 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 snoU13.31-201ENST00000607291 104 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 Z82243.1-201ENST00000609432 473 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 AC004908.3-201ENST00000610248 625 ntBASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.01□□□□□ -2.09
RPAP3Q9H6T3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
RPAP3Q9H6T3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPAP3Q9H6T3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2□□□□□ -2.09
RPAP3Q9H6T3 RNU6-1210P-201ENST00000363775 107 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RPAP3Q9H6T3 FGF7P8-201ENST00000402994 292 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPAP3Q9H6T3 AC007969.2-201ENST00000441891 191 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2□□□□□ -2.09
RPAP3Q9H6T3 OFD1P4Y-201ENST00000455273 1179 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 snoU13.14-201ENST00000459372 104 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 RNU6-965P-201ENST00000516721 96 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 AP003392.2-201ENST00000527269 208 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 AC063943.3-201ENST00000615562 356 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 AC007792.1-201ENST00000623023 402 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 U4.7-201ENST00000638126 106 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2□□□□□ -2.09
RPAP3Q9H6T3 ZNF680P1-201ENST00000436625 1469 ntBASIC2□□□□□ -2.09
RPAP3Q9H6T3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RPAP3Q9H6T3 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 Y_RNA.159-201ENST00000363674 87 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 RNU6-944P-201ENST00000364023 107 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 RNU6-393P-201ENST00000384475 107 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 RNU6-1127P-201ENST00000384580 107 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 SNORA16.2-201ENST00000390991 127 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 CBX3P9-201ENST00000402326 552 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 RNA5SP450-201ENST00000411206 102 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 MTATP6P18-201ENST00000417994 673 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 MTCYBP8-201ENST00000422855 651 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AL591043.1-201ENST00000432461 424 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 MTCO2P16-201ENST00000436962 677 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 RPL39P29-201ENST00000447779 157 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 SCARNA18-201ENST00000459004 134 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AC034114.1-201ENST00000520293 285 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AP005435.4-201ENST00000529514 284 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AL356057.1-201ENST00000533798 831 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 MIR4419B-201ENST00000577260 68 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 MIR5583-1-201ENST00000580941 59 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 MTATP6P3-201ENST00000581686 676 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AC110760.3-201ENST00000598794 467 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AC104073.3-201ENST00000610942 955 ntBASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
RPAP3Q9H6T3 AL159153.1-201ENST00000619688 317 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms