Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 Y_RNA.461-201ENST00000384263 103 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 U3.42-201ENST00000408746 214 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 RNU6-1156P-201ENST00000410365 100 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 RNU6-293P-201ENST00000411259 106 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AL139281.1-201ENST00000422120 335 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC108938.1-201ENST00000451204 136 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 RNU6-1132P-201ENST00000459214 107 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC006483.1-201ENST00000487308 313 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 RPL17P19-201ENST00000489069 552 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC018437.1-201ENST00000492214 406 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC008716.1-201ENST00000511084 513 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC113155.1-201ENST00000511141 769 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 RNU6-307P-201ENST00000516743 106 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC040926.1-201ENST00000530195 238 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 LRRC37A5P-203ENST00000580181 585 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 MIR3128-201ENST00000581957 66 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 RAC1P9-201ENST00000604990 392 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC123912.5-201ENST00000605470 343 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AL512643.1-201ENST00000635735 524 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC103988.1-201ENST00000566382 2177 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AL136360.1-201ENST00000503377 1900 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
EBF3Q9H4W6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
EBF3Q9H4W6 AC010615.1-201ENST00000594254 1764 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.60-201ENST00000362831 98 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.288-201ENST00000364854 92 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.376-201ENST00000365638 108 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 RNU6-395P-201ENST00000365662 106 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 RNU4-70P-201ENST00000384579 139 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3□□□□□ -1.93
EBF3Q9H4W6 RNU2-38P-201ENST00000410856 79 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 RNA5SP184-201ENST00000411071 108 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 RNU6-607P-201ENST00000411283 108 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AL030996.1-201ENST00000411430 235 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AL592148.1-201ENST00000413568 445 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AL353621.1-201ENST00000418219 243 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3□□□□□ -1.93
EBF3Q9H4W6 AC087499.2-201ENST00000432861 149 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3□□□□□ -1.93
EBF3Q9H4W6 AC073910.1-201ENST00000445047 438 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 PCMTD1P1-201ENST00000455560 355 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3□□□□□ -1.93
EBF3Q9H4W6 FO393415.2-201ENST00000480085 343 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AC011005.2-201ENST00000487324 359 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 HMGB3P17-201ENST00000504195 649 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 RNU1-86P-201ENST00000516108 154 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 RNU1-107P-201ENST00000516617 154 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3□□□□□ -1.93
EBF3Q9H4W6 AC084851.1-201ENST00000529105 249 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AC007375.1-201ENST00000554513 578 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AL157871.3-201ENST00000557231 293 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3□□□□□ -1.93
EBF3Q9H4W6 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3□□□□□ -1.93
EBF3Q9H4W6 MTND4LP5-201ENST00000605152 292 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 AL110115.1-201ENST00000614396 364 ntBASIC3□□□□□ -1.93
EBF3Q9H4W6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3□□□□□ -1.93
EBF3Q9H4W6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3□□□□□ -1.93
EBF3Q9H4W6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
EBF3Q9H4W6 AL359693.1-201ENST00000614959 2407 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AC062016.1-201ENST00000355719 319 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.245-201ENST00000364493 95 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 SNORA9.2-201ENST00000365361 133 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 RNU6-596P-201ENST00000365395 98 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.350-201ENST00000365409 98 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 RNU6-209P-201ENST00000384118 107 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 Y_RNA.577-201ENST00000384794 101 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AL445529.1-201ENST00000398713 389 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 PGBD4P6-201ENST00000421501 610 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AC009237.8-201ENST00000445492 379 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 OR2AQ1P-201ENST00000451972 200 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AC022493.1-201ENST00000492984 337 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 SNORA40.14-201ENST00000516543 86 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 RNA5SP291-201ENST00000517222 105 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 TRAV32-201ENST00000553993 340 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AL158827.2-201ENST00000602494 330 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AC024153.1-201ENST00000603103 365 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 RMST_4.1-201ENST00000616886 107 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 AL691447.3-201ENST00000635020 330 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 FAM35CP-201ENST00000554755 2470 ntBASIC2.99□□□□□ -1.93
EBF3Q9H4W6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms