Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 RNU7-180P-201ENST00000459240 63 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AC009646.1-201ENST00000510455 318 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 RNU6-506P-201ENST00000516553 94 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 Y_RNA.693-201ENST00000516641 110 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AC079598.5-201ENST00000547460 117 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 HIF1AP1-201ENST00000553642 175 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AL354685.2-201ENST00000448218 1447 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 Z75746.1-201ENST00000440243 2080 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 MTND4P14-201ENST00000435799 1354 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 Y_RNA.3-201ENST00000362331 103 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 Y_RNA.399-201ENST00000383955 105 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 RNU6-434P-201ENST00000384376 107 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 SNORA16.2-201ENST00000390991 127 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 SNORD70.1-201ENST00000391007 85 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 CYCSP33-201ENST00000414485 327 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 RPL7P12-201ENST00000446719 750 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 SCARNA18-201ENST00000459004 134 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 RPL36AP48-201ENST00000485521 314 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 RNU2-69P-201ENST00000516061 100 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AC025678.1-201ENST00000567861 338 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AP000942.3-201ENST00000603702 160 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AL138963.2-201ENST00000605137 226 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AC092954.2-201ENST00000609103 430 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AC022418.1-201ENST00000624118 445 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 SCARNA4-202ENST00000625402 129 ntBASIC1.87□□□□□ -2.11
NXF3Q9H4D5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
NXF3Q9H4D5 RNU6-942P-201ENST00000363002 107 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 RNU6-457P-201ENST00000363999 107 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 FTH1P15-201ENST00000406984 280 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 RAP1BP3-201ENST00000407180 549 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AIMP1P2-201ENST00000425294 312 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 MTND1P34-201ENST00000438556 671 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 MRPS17P9-201ENST00000511924 393 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 RNU5B-3P-201ENST00000516601 115 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 RNU6-835P-201ENST00000516974 104 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AP004607.1-201ENST00000524456 203 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AL512360.1-201ENST00000555346 234 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 ANP32BP3-201ENST00000559213 706 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 MIR4529-201ENST00000578110 78 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 MIR4424-201ENST00000585257 86 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AL109918.3-201ENST00000603072 338 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AC096772.1-201ENST00000609146 564 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 AC093788.1-201ENST00000609356 927 ntBASIC1.86□□□□□ -2.11
NXF3Q9H4D5 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.86□□□□□ -2.11
NXF3Q9H4D5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 SNORA69-201ENST00000383895 132 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 Y_RNA.480-201ENST00000384364 102 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 MIR181A1-201ENST00000385026 110 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AL030996.1-201ENST00000411430 235 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 PGBD4P6-201ENST00000421501 610 ntBASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.85□□□□□ -2.11
NXF3Q9H4D5 AC108667.1-201ENST00000428618 249 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms