Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 SNORD116-1-201ENST00000384335 95 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 SNORD116-7-201ENST00000384404 95 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 SNORD116-5-201ENST00000384462 95 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 Y_RNA.623-201ENST00000411128 95 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 OR9R1P-201ENST00000412200 877 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC016831.2-201ENST00000417179 352 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC008267.5-201ENST00000424928 265 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 MTCO3P5-201ENST00000433620 714 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 MTCO2P16-201ENST00000436962 677 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AL360271.2-201ENST00000447710 161 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 RNU6-956P-201ENST00000458868 103 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC006512.1-201ENST00000468816 291 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 RNU6-445P-201ENST00000516949 107 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 RNU6-430P-201ENST00000517078 107 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 MIR4775-201ENST00000581168 75 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 MIR548AC-201ENST00000585049 88 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC006566.1-201ENST00000608943 513 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC093788.1-201ENST00000609356 927 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC109347.2-201ENST00000610220 349 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC009509.4-201ENST00000619202 509 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AC011155.2-201ENST00000623202 216 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 AL359740.1-201ENST00000624340 592 ntBASIC1.48□□□□□ -2.17
LHX5Q9H2C1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LHX5Q9H2C1 MIR412-201ENST00000362142 91 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 MIR454-201ENST00000390180 115 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AL365338.1-201ENST00000422282 858 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC133104.1-201ENST00000429100 218 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC000111.3-201ENST00000433478 193 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 MTND4P32-201ENST00000437189 1237 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 MTND2P29-201ENST00000438595 412 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC132479.1-201ENST00000449160 144 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 NDUFB1P2-201ENST00000449477 176 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC010424.1-201ENST00000506336 297 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 MTCO2P4-201ENST00000517968 247 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 CYCSP27-201ENST00000527643 293 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC135279.1-201ENST00000543493 504 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 IMMP1LP2-201ENST00000552954 492 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC092325.1-201ENST00000566449 554 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC093249.1-201ENST00000567049 203 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 MIR3198-2-201ENST00000577868 80 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 BNIP3P25-201ENST00000596023 559 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 Z84480.1-201ENST00000605131 311 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC021646.1-201ENST00000605469 484 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AL157834.3-201ENST00000615543 103 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AC072046.2-201ENST00000618366 268 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.47□□□□□ -2.17
LHX5Q9H2C1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 AL390237.1-201ENST00000404226 1415 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
LHX5Q9H2C1 SNORA62.1-201ENST00000364287 154 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 SNORD14B-201ENST00000364533 90 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 RNU6-384P-201ENST00000364900 104 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LHX5Q9H2C1 RNU6-1179P-201ENST00000384667 107 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 RNU6-387P-201ENST00000411331 105 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 RNA5SP111-201ENST00000411386 101 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
LHX5Q9H2C1 MTCO2P34-201ENST00000421994 607 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.46□□□□□ -2.18
LHX5Q9H2C1 MTCO2P11-201ENST00000431069 680 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 AL627311.1-201ENST00000431514 115 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 VN1R108P-201ENST00000431580 830 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 AL358934.1-201ENST00000432346 324 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 C1DP4-201ENST00000455429 424 ntBASIC1.46□□□□□ -2.18
LHX5Q9H2C1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.46□□□□□ -2.18
LHX5Q9H2C1 RPL31P3-201ENST00000458430 332 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms