Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC138627.2-201ENST00000624202 601 ntBASIC3.16□□□□□ -1.9
VPS16Q9H269 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS16Q9H269 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS16Q9H269 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS16Q9H269 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS16Q9H269 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VPS16Q9H269 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VPS16Q9H269 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
VPS16Q9H269 Y_RNA.188-201ENST00000363952 111 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 CD24P4-201ENST00000382840 243 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 RNU6-1027P-201ENST00000383998 107 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 MIR512-1-201ENST00000384913 84 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 MIR767-201ENST00000390228 109 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 RNU2-23P-201ENST00000410545 195 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS16Q9H269 BX276092.3-201ENST00000424182 230 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 RPL23AP50-201ENST00000434149 455 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS16Q9H269 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS16Q9H269 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS16Q9H269 AC112492.4-201ENST00000456549 352 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 AC068781.1-201ENST00000488231 618 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 AC105758.1-201ENST00000506038 399 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS16Q9H269 Y_RNA.687-201ENST00000516558 91 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS16Q9H269 SUB1P3-201ENST00000564581 315 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 AC005899.2-201ENST00000584353 90 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 AC123912.5-201ENST00000605470 343 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS16Q9H269 AL606534.2-204ENST00000635008 178 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS16Q9H269 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
VPS16Q9H269 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS16Q9H269 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS16Q9H269 AL355596.1-201ENST00000565399 3996 ntBASIC3.15□□□□□ -1.91
VPS16Q9H269 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
VPS16Q9H269 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VPS16Q9H269 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS16Q9H269 AC004944.1-201ENST00000517807 3059 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-37P-201ENST00000362692 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNA5SP374-201ENST00000362939 125 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 Y_RNA.106-201ENST00000363189 100 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 SNORD46.1-201ENST00000364139 104 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-11P-201ENST00000364234 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-7-201ENST00000364784 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-8-201ENST00000365467 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-25P-201ENST00000383873 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-1-201ENST00000383898 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-48P-201ENST00000384161 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-36P-201ENST00000384172 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-4P-201ENST00000384205 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-5P-201ENST00000384238 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-3P-201ENST00000384314 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-16P-201ENST00000384385 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-15P-201ENST00000384534 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-2-201ENST00000384627 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-29P-201ENST00000384637 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-9-201ENST00000384776 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-33P-201ENST00000384793 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-750P-201ENST00000390946 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-1109P-201ENST00000391187 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-174P-201ENST00000410406 106 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 Y_RNA.618-201ENST00000410949 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS16Q9H269 AL161651.1-201ENST00000440882 223 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RPL27AP5-201ENST00000469428 449 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 AC018437.1-201ENST00000492214 406 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 MRPS35P2-201ENST00000508242 191 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-475P-201ENST00000516073 104 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 Y_RNA.668-201ENST00000516233 93 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-56P-201ENST00000516986 93 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-1271P-201ENST00000517049 105 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 Y_RNA.721-201ENST00000517207 102 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 AC109479.2-201ENST00000517842 174 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS16Q9H269 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS16Q9H269 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.14□□□□□ -1.91
VPS16Q9H269 AL160281.1-201ENST00000605307 311 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 RNU6-6P-201ENST00000606623 107 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS16Q9H269 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
VPS16Q9H269 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS16Q9H269 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VPS16Q9H269 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS16Q9H269 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS16Q9H269 Y_RNA.48-201ENST00000362710 103 ntBASIC3.13□□□□□ -1.91
VPS16Q9H269 RNU1-100P-201ENST00000365255 165 ntBASIC3.13□□□□□ -1.91
VPS16Q9H269 RNU5E-7P-201ENST00000365290 117 ntBASIC3.13□□□□□ -1.91
VPS16Q9H269 AL445529.1-201ENST00000398713 389 ntBASIC3.13□□□□□ -1.91
VPS16Q9H269 SNORD88.1-201ENST00000408684 91 ntBASIC3.13□□□□□ -1.91
VPS16Q9H269 RNU2-49P-201ENST00000410666 184 ntBASIC3.13□□□□□ -1.91
VPS16Q9H269 AL030996.1-201ENST00000411430 235 ntBASIC3.13□□□□□ -1.91
VPS16Q9H269 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS16Q9H269 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms