Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AL512604.1-201ENST00000404812 257 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 MIR1283-2-201ENST00000408621 87 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 CBX3P6-201ENST00000430257 527 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 AC002486.1-201ENST00000435098 391 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 AL451074.3-201ENST00000437709 472 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 RPL23AP3-201ENST00000453844 468 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.98□□□□□ -2.09
DDX47Q9H0S4 TPT1P7-201ENST00000458300 517 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 RPL31P3-201ENST00000458430 332 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 SNRPGP7-201ENST00000469016 106 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 RPS3AP17-201ENST00000472594 777 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 RPL21P99-201ENST00000480369 423 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 ANXA2P1-201ENST00000505539 926 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 HMGB1P29-201ENST00000505659 499 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.98□□□□□ -2.09
DDX47Q9H0S4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.98□□□□□ -2.09
DDX47Q9H0S4 AC027807.1-201ENST00000559921 996 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 AC103987.3-201ENST00000582071 292 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 AC008749.1-201ENST00000597650 306 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 VN1R107P-201ENST00000601784 209 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 AL034555.1-201ENST00000604816 211 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.98□□□□□ -2.09
DDX47Q9H0S4 MIR1248-201ENST00000629190 106 ntBASIC1.98□□□□□ -2.09
DDX47Q9H0S4 RNU4-15P-201ENST00000362613 141 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 RNU6-743P-201ENST00000364151 106 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 RNU6-1141P-201ENST00000364520 107 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 Y_RNA.296-201ENST00000364930 108 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 RNU6-827P-201ENST00000365553 106 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 Y_RNA.381-201ENST00000365666 102 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 SNORD14D-201ENST00000384390 87 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 MIR29C-201ENST00000385231 88 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 RNU6-1158P-201ENST00000391167 107 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 SRIP3-201ENST00000413200 219 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AL590556.1-201ENST00000423231 483 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AC022447.4-201ENST00000504053 364 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AC108078.1-201ENST00000508073 725 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AC091133.4-201ENST00000511142 308 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 MTND3P5-201ENST00000512798 333 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AC103996.1-201ENST00000555468 102 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 MIR3941-201ENST00000582572 103 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AL109918.3-201ENST00000603072 338 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 RN7SKP299-201ENST00000606679 301 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 AC007684.1-201ENST00000609671 477 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 U2.17-201ENST00000611454 95 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 SNORD98-201ENST00000636377 67 ntBASIC1.97□□□□□ -2.09
DDX47Q9H0S4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX47Q9H0S4 Y_RNA.1-201ENST00000352915 104 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 SNORD32A-201ENST00000364805 84 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 BTF3L4P2-201ENST00000392798 346 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 DEFB108C-201ENST00000400154 252 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 BX510359.4-201ENST00000423750 193 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC010975.2-201ENST00000427781 588 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AL445646.1-201ENST00000431784 216 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 SNAP23P1-201ENST00000433229 246 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AL353689.1-201ENST00000438895 199 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC096638.1-201ENST00000444678 216 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 PMCHL2-203ENST00000457791 237 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC087884.1-201ENST00000469738 328 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AL163973.1-201ENST00000484753 577 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 CCDC34P1-201ENST00000507441 517 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC069113.1-201ENST00000517763 267 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 MIR4648-201ENST00000580107 72 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC004223.2-201ENST00000590309 544 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC010620.1-201ENST00000601088 1102 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 uc_338.34-201ENST00000617467 174 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AL354950.2-201ENST00000617939 290 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.96□□□□□ -2.1
DDX47Q9H0S4 AC092881.1-201ENST00000638218 2733 ntBASIC1.96□□□□□ -2.1
DDX47Q9H0S4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
DDX47Q9H0S4 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 SNORD116-9-201ENST00000384000 95 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 SNORD116-3-201ENST00000384287 95 ntBASIC1.95□□□□□ -2.1
DDX47Q9H0S4 SNORD116-7-201ENST00000384404 95 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms