Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 Y_RNA.623-201ENST00000411128 95 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 MTND4P3-201ENST00000417829 541 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.83□□□□□ -2.28
TRIM4Q9C037 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.83□□□□□ -2.28
TRIM4Q9C037 MTCO2P25-201ENST00000447065 681 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 RPS27AP8-201ENST00000452665 445 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.83□□□□□ -2.28
TRIM4Q9C037 RNU1-131P-201ENST00000458943 161 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 AC114982.1-201ENST00000469402 321 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.83□□□□□ -2.28
TRIM4Q9C037 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.83□□□□□ -2.28
TRIM4Q9C037 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.83□□□□□ -2.28
TRIM4Q9C037 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.83□□□□□ -2.28
TRIM4Q9C037 HMGB1P33-201ENST00000563485 527 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 AC015688.6-201ENST00000577737 104 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 AC092574.1-201ENST00000609771 420 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 AL355816.2-201ENST00000610049 647 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 AL159153.1-201ENST00000619688 317 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 MIR8065-201ENST00000620577 100 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.83□□□□□ -2.28
TRIM4Q9C037 AC099654.5-201ENST00000636479 350 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.82□□□□□ -2.28
TRIM4Q9C037 SMIM11P1-201ENST00000369586 178 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 RNU6-224P-201ENST00000384055 107 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 RNU11-5P-201ENST00000391216 129 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 AL357139.1-201ENST00000407792 426 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.82□□□□□ -2.28
TRIM4Q9C037 AL161935.2-201ENST00000414627 60 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 PGBD4P5-201ENST00000445958 426 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.82□□□□□ -2.28
TRIM4Q9C037 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 AP003355.1-201ENST00000518956 587 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.82□□□□□ -2.28
TRIM4Q9C037 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 AC007792.1-201ENST00000623023 402 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 MIR6086-201ENST00000638065 55 ntBASIC0.82□□□□□ -2.28
TRIM4Q9C037 Y_RNA.255-201ENST00000364581 97 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 Y_RNA.332-201ENST00000365271 113 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.81□□□□□ -2.28
TRIM4Q9C037 AC092809.3-201ENST00000415453 231 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 MTCYBP5-201ENST00000423752 1135 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 AC013262.1-201ENST00000426710 252 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.81□□□□□ -2.28
TRIM4Q9C037 AC093899.1-201ENST00000457984 376 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.81□□□□□ -2.28
TRIM4Q9C037 RNU6-677P-201ENST00000516914 101 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 RNA5SP437-201ENST00000517249 129 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
TRIM4Q9C037 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.81□□□□□ -2.28
TRIM4Q9C037 AC090578.1-201ENST00000604955 591 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 MIR15A-201ENST00000607334 83 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 AL354696.1-201ENST00000614652 497 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 RMST_4.1-201ENST00000616886 107 ntBASIC0.81□□□□□ -2.28
TRIM4Q9C037 SNORD3E-201ENST00000362899 217 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 RNU1-124P-201ENST00000363861 145 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 RNU1-36P-201ENST00000365130 165 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 RNU6-1065P-201ENST00000384513 106 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 RNU6-1235P-201ENST00000384559 107 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 MIR520A-201ENST00000384862 85 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 MIR515-2-201ENST00000384883 83 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 MIR515-1-201ENST00000384884 83 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 RN7SKP266-201ENST00000410232 287 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.8□□□□□ -2.28
TRIM4Q9C037 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.8□□□□□ -2.28
TRIM4Q9C037 RPL31P35-201ENST00000431058 377 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 RNU6-498P-201ENST00000459468 107 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 AC113347.3-201ENST00000509113 148 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 MTCO3P27-201ENST00000514397 196 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 SNORD116-28-201ENST00000516123 91 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 RNU6-1092P-201ENST00000516955 87 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 AC091163.3-201ENST00000518269 1144 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 AL512310.8-201ENST00000550183 120 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 AL391001.1-201ENST00000602747 715 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 MTATP6P2-201ENST00000603319 678 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 MZT1P2-201ENST00000604387 248 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 BNIP3P31-201ENST00000604515 566 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRIM4Q9C037 AC124016.2-201ENST00000610058 665 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 AC106800.4-201ENST00000614905 153 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
TRIM4Q9C037 MIR330-201ENST00000362196 94 ntBASIC0.79□□□□□ -2.28
TRIM4Q9C037 RNU6-621P-201ENST00000364752 109 ntBASIC0.79□□□□□ -2.28
TRIM4Q9C037 RNU6-968P-201ENST00000384076 107 ntBASIC0.79□□□□□ -2.28
TRIM4Q9C037 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
TRIM4Q9C037 VPS26BP1-201ENST00000417155 755 ntBASIC0.79□□□□□ -2.28
TRIM4Q9C037 AL627311.1-201ENST00000431514 115 ntBASIC0.79□□□□□ -2.28
TRIM4Q9C037 AC132479.1-201ENST00000449160 144 ntBASIC0.79□□□□□ -2.28
TRIM4Q9C037 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
TRIM4Q9C037 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.79□□□□□ -2.28
TRIM4Q9C037 AC027335.2-201ENST00000624030 375 ntBASIC0.79□□□□□ -2.28
TRIM4Q9C037 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.79□□□□□ -2.28
TRIM4Q9C037 Y_RNA.311-201ENST00000365068 96 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 Y_RNA.471-201ENST00000384312 102 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 MIR100-201ENST00000385259 80 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 RN7SKP61-201ENST00000410642 295 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
TRIM4Q9C037 PIGFP2-201ENST00000421400 651 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms