Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 TNPO1P3-201ENST00000436471 2662 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 Y_RNA.33-201ENST00000362591 102 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU1-83P-201ENST00000363426 164 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-454P-201ENST00000364292 107 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORA71.2-201ENST00000364941 134 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORA1-201ENST00000384107 130 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-895P-201ENST00000384125 103 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNA5SP187-201ENST00000384400 119 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORD96B-201ENST00000386148 79 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 U3.19-201ENST00000390893 196 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AL034374.1-201ENST00000406329 351 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-613P-201ENST00000410412 108 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNA5SP475-201ENST00000410568 110 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AL133384.1-201ENST00000412744 351 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC017078.1-201ENST00000416146 368 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AL356387.2-201ENST00000422272 243 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC092047.1-201ENST00000424997 240 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC074348.1-201ENST00000426503 132 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC009237.8-201ENST00000445492 379 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 PHBP16-201ENST00000446318 950 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RPS17P13-201ENST00000448974 407 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 snoU13.11-201ENST00000459219 104 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC117454.1-201ENST00000491120 168 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 FGF7P7-201ENST00000514120 227 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORA70.11-201ENST00000515987 138 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORA70.13-201ENST00000516116 138 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-1108P-201ENST00000516308 104 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU7-115P-201ENST00000516433 55 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-352P-201ENST00000516908 107 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AP003484.1-201ENST00000530974 250 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC006349.1-201ENST00000555526 235 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 TVP23BP1-201ENST00000557500 617 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RPL23AP87-202ENST00000573039 466 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RPL23AP92-201ENST00000603609 255 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC096720.1-201ENST00000604441 183 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 HNRNPDLP4-201ENST00000605144 301 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 Y_RNA.773-201ENST00000607168 90 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 MIR6891-201ENST00000618788 93 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AL139811.1-201ENST00000424779 2299 ntBASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-3Q9BYR4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AL133412.1-201ENST00000380194 2992 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC008079.2-201ENST00000623543 20396 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms