Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 AC244670.1-201ENST00000436879 112 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 UQCRBP2-201ENST00000447827 297 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 AP002884.2-201ENST00000471647 395 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 AC020593.1-201ENST00000507399 299 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 RNU6-581P-201ENST00000516214 105 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 MIR2114-201ENST00000516645 80 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 MIR2116-201ENST00000517221 80 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 MRPS18CP4-201ENST00000535821 231 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 MIR3144-201ENST00000579460 79 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 IPO5P1-202ENST00000600039 287 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 AC022441.3-201ENST00000605737 136 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 RNU6-91P-201ENST00000607774 107 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 MIR492-201ENST00000638676 116 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM56Q9BRZ2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.09□□□□□ -1.76
TRIM56Q9BRZ2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM56Q9BRZ2 FAM35DP-201ENST00000323387 2712 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 MIR383-201ENST00000362257 73 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 RNA5SP322-201ENST00000363617 119 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-873P-201ENST00000363833 107 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 Y_RNA.262-201ENST00000364641 102 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-923P-201ENST00000364753 107 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-213P-201ENST00000384051 104 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 MIR487A-201ENST00000385009 80 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 SNORA48.7-201ENST00000391302 135 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 AC005300.1-201ENST00000428401 373 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 AC112220.1-201ENST00000434628 355 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 AL161651.1-201ENST00000440882 223 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 AC074133.1-201ENST00000515696 183 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 AC233702.2-202ENST00000562547 291 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 RN7SL600P-201ENST00000581811 299 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 VN1R85P-201ENST00000601587 426 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 ZYXP1-201ENST00000617638 118 ntBASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
TRIM56Q9BRZ2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 BX322639.1-202ENST00000423987 2213 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-1285P-201ENST00000363480 105 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 Y_RNA.308-201ENST00000365043 101 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-804P-201ENST00000384286 107 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-748P-201ENST00000384648 107 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 SNORA40.19-201ENST00000390846 128 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 RNU6-394P-201ENST00000410735 107 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 CYCSP48-201ENST00000417124 323 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 TBCAP1-201ENST00000436520 327 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AC010095.1-201ENST00000443543 144 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 RPL23AP3-201ENST00000453844 468 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 RNU7-23P-201ENST00000459465 62 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 SNORA31.9-201ENST00000516429 84 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AC108706.1-201ENST00000611053 297 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 ZNF204P-201ENST00000416749 2397 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 MAPK10-373ENST00000641983 6772 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 AC010680.1-201ENST00000590024 3590 ntBASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM56Q9BRZ2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 Y_RNA.8-201ENST00000362353 102 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 RNA5SP502-201ENST00000362694 119 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 SNORA36A-201ENST00000384221 132 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 MIR23B-201ENST00000384832 97 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 AL451074.5-201ENST00000415894 435 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 AC138623.1-201ENST00000418060 216 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 AC012306.1-201ENST00000423267 114 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 SNORA71B-202ENST00000439232 272 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 AL714022.1-201ENST00000439897 151 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 RPL39P29-201ENST00000447779 157 ntBASIC4.06□□□□□ -1.76
TRIM56Q9BRZ2 AL441985.1-201ENST00000457727 251 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms