Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MIR29B2-201ENST00000385055 81 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.28□□□□□ -2.04
CPNE1Q99829 Z82209.1-201ENST00000422141 2135 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 UBE2V1P4-201ENST00000425374 344 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 SNRPGP7-201ENST00000469016 106 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.28□□□□□ -2.04
CPNE1Q99829 RPS29P25-201ENST00000481709 171 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 AC022447.4-201ENST00000504053 364 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.28□□□□□ -2.04
CPNE1Q99829 RNU6-1332P-201ENST00000516666 104 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 RN7SKP256-201ENST00000517201 314 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 AC104576.1-201ENST00000524225 88 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.28□□□□□ -2.04
CPNE1Q99829 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
CPNE1Q99829 AP003465.2-201ENST00000602571 373 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 ELOCP5-201ENST00000604924 333 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 CTHRC1P1-201ENST00000605383 469 ntBASIC2.28□□□□□ -2.04
CPNE1Q99829 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.28□□□□□ -2.04
CPNE1Q99829 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.28□□□□□ -2.04
CPNE1Q99829 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.04
CPNE1Q99829 MTND4P23-201ENST00000447723 1363 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CPNE1Q99829 MIR561-201ENST00000385216 97 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 RN7SKP61-201ENST00000410642 295 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AP000275.1-201ENST00000411943 390 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AC009161.1-201ENST00000417306 376 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.27□□□□□ -2.05
CPNE1Q99829 RPL23AP95-201ENST00000426806 265 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AC078809.1-201ENST00000427601 140 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AC244670.1-201ENST00000436879 112 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AC018634.1-201ENST00000437554 401 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.27□□□□□ -2.05
CPNE1Q99829 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.27□□□□□ -2.05
CPNE1Q99829 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.27□□□□□ -2.05
CPNE1Q99829 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.27□□□□□ -2.05
CPNE1Q99829 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.27□□□□□ -2.05
CPNE1Q99829 MTCYBP18-201ENST00000501056 747 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 FAM206BP-201ENST00000510179 541 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 RNU5F-2P-201ENST00000516066 82 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.27□□□□□ -2.05
CPNE1Q99829 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.27□□□□□ -2.05
CPNE1Q99829 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.27□□□□□ -2.05
CPNE1Q99829 MIR3136-201ENST00000583498 78 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.27□□□□□ -2.05
CPNE1Q99829 AC007014.2-201ENST00000615581 479 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 U6atac.1-201ENST00000616025 117 ntBASIC2.27□□□□□ -2.05
CPNE1Q99829 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.27□□□□□ -2.05
CPNE1Q99829 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.27□□□□□ -2.05
CPNE1Q99829 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.27□□□□□ -2.05
CPNE1Q99829 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.27□□□□□ -2.05
CPNE1Q99829 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CPNE1Q99829 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CPNE1Q99829 snoU2_19.1-201ENST00000362361 80 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 RN7SKP158-201ENST00000410453 326 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 Y_RNA.599-201ENST00000410489 109 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 ZNF885P-201ENST00000420174 1098 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.26□□□□□ -2.05
CPNE1Q99829 AL031659.1-201ENST00000447075 539 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 AL353752.1-201ENST00000454946 260 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 RNU7-66P-201ENST00000459469 62 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 U8.21-201ENST00000459536 136 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.26□□□□□ -2.05
CPNE1Q99829 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.26□□□□□ -2.05
CPNE1Q99829 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.26□□□□□ -2.05
CPNE1Q99829 AC092436.3-201ENST00000511788 257 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.26□□□□□ -2.05
CPNE1Q99829 RNU6-612P-201ENST00000516909 102 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.26□□□□□ -2.05
CPNE1Q99829 HSPE1P4-201ENST00000550617 308 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 AC026371.1-201ENST00000551867 419 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 TRAV32-201ENST00000553993 340 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.26□□□□□ -2.05
CPNE1Q99829 AC092794.1-201ENST00000612734 582 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CPNE1Q99829 AC002553.4-201ENST00000616896 331 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.26□□□□□ -2.05
CPNE1Q99829 CTSLP2-204ENST00000629029 392 ntBASIC2.26□□□□□ -2.05
CPNE1Q99829 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.26□□□□□ -2.05
CPNE1Q99829 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CPNE1Q99829 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CPNE1Q99829 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CPNE1Q99829 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CPNE1Q99829 AC092268.1-201ENST00000342691 405 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CPNE1Q99829 Y_RNA.414-201ENST00000384011 101 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 RNU1-52P-201ENST00000384190 164 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 RNU6-1274P-201ENST00000384557 107 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 MIR144-201ENST00000384886 86 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 AC007064.1-201ENST00000412238 351 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.25□□□□□ -2.05
CPNE1Q99829 VN1R36P-201ENST00000414936 291 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 AL590556.1-201ENST00000423231 483 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 AL133396.1-201ENST00000432048 687 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 AC009238.1-201ENST00000442165 424 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 AC009237.6-201ENST00000446969 424 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 AC011753.1-201ENST00000451001 220 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 RPL9P9-202ENST00000466501 579 ntBASIC2.25□□□□□ -2.05
CPNE1Q99829 RN7SL636P-201ENST00000497504 294 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms