Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 VN1R82P-201ENST00000601481 356 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AL136363.2-201ENST00000604173 851 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AL022154.1-201ENST00000604698 785 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AC024940.5-201ENST00000622889 474 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 MIR6767-201ENST00000637302 66 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
AP1S3Q96PC3 AL159152.1-201ENST00000635019 2587 ntBASIC0.36□□□□□ -2.35
AP1S3Q96PC3 ELL2P3-201ENST00000457883 1602 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 AL391994.1-201ENST00000254724 282 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
AP1S3Q96PC3 RNU5A-8P-201ENST00000364102 114 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 RNU1-96P-201ENST00000364163 162 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 RNU4-12P-201ENST00000365233 139 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 RNU6-969P-201ENST00000383900 105 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
AP1S3Q96PC3 RNU6-278P-201ENST00000390945 109 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 MTCO3P41-201ENST00000414801 328 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 AL353718.1-201ENST00000451028 517 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 ATP5J2P3-201ENST00000451550 258 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 AC098869.1-201ENST00000481627 292 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 AC005741.1-201ENST00000511094 432 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 RNA5SP121-201ENST00000516537 101 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.35□□□□□ -2.35
AP1S3Q96PC3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.35□□□□□ -2.35
AP1S3Q96PC3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.35□□□□□ -2.35
AP1S3Q96PC3 CYP4A27P-201ENST00000567218 190 ntBASIC0.35□□□□□ -2.35
AP1S3Q96PC3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
AP1S3Q96PC3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
AP1S3Q96PC3 RNU5B-4P-201ENST00000363508 111 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AF228730.1-201ENST00000397972 663 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 RPS3AP36-201ENST00000398190 775 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AP000275.1-201ENST00000411943 390 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AL590556.1-201ENST00000423231 483 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 UBE2D3P3-201ENST00000426992 425 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.34□□□□□ -2.36
AP1S3Q96PC3 MTND2P33-201ENST00000506452 1031 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC021146.8-201ENST00000507455 733 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC034244.1-201ENST00000507687 207 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC108078.2-201ENST00000510750 236 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
AP1S3Q96PC3 SNORD79.1-201ENST00000516069 84 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 RNU6-1041P-201ENST00000516254 102 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 RNA5SP255-201ENST00000516370 107 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 Y_RNA.689-201ENST00000516589 107 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 RNA5SP384-201ENST00000516615 116 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 DEFB108E-201ENST00000524692 240 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC005776.1-201ENST00000603164 290 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC018889.1-201ENST00000605372 397 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AL353765.1-201ENST00000605514 183 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC099785.1-201ENST00000605697 437 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 RMST_7.1-201ENST00000621935 268 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC093875.1-201ENST00000623688 504 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 AC106858.1-201ENST00000637497 429 ntBASIC0.34□□□□□ -2.36
AP1S3Q96PC3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.33□□□□□ -2.36
AP1S3Q96PC3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
AP1S3Q96PC3 MIR412-201ENST00000362142 91 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 RNU6-1285P-201ENST00000363480 105 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 SNORA40.2-201ENST00000390847 128 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 MIR1284-201ENST00000408337 120 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 AL031779.1-201ENST00000415663 330 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 VPS26BP1-201ENST00000417155 755 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 ELOCP9-201ENST00000418624 239 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 ARL5AP1-201ENST00000418991 388 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.33□□□□□ -2.36
AP1S3Q96PC3 AL035398.1-201ENST00000430869 322 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 PAXBP1P1-201ENST00000449315 447 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 NDUFB1P2-201ENST00000449477 176 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 AC010531.2-201ENST00000465012 153 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
AP1S3Q96PC3 TRMT112P2-201ENST00000512910 132 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 SNORA31.4-201ENST00000516049 129 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.33□□□□□ -2.36
AP1S3Q96PC3 AC011604.1-201ENST00000545978 196 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.33□□□□□ -2.36
AP1S3Q96PC3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.33□□□□□ -2.36
AP1S3Q96PC3 CYP3A137P-201ENST00000562436 69 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 TPRKBP2-201ENST00000565969 475 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 MIR5695-201ENST00000579717 85 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 AL138889.2-201ENST00000603883 242 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 CTHRC1P1-201ENST00000605383 469 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 AC126177.8-201ENST00000618339 1015 ntBASIC0.33□□□□□ -2.36
AP1S3Q96PC3 SNORA33-201ENST00000363664 130 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 RNU6-946P-201ENST00000383878 107 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 MIR10B-201ENST00000385011 110 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 RNA5SP111-201ENST00000411386 101 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 AC114737.2-201ENST00000421583 173 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.32□□□□□ -2.36
AP1S3Q96PC3 RPL23AP95-201ENST00000426806 265 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 MTCO3P18-201ENST00000440206 761 ntBASIC0.32□□□□□ -2.36
AP1S3Q96PC3 AL358794.1-201ENST00000445689 381 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms