Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SNORD56.1-201ENST00000362913 68 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 Y_RNA.99-201ENST00000363138 105 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 RNY3P10-201ENST00000384764 102 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
COL21A1Q96P44 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 RNU6-1245P-201ENST00000411130 106 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 RN7SKP142-201ENST00000411236 328 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 POLHP1-201ENST00000411806 470 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.52□□□□□ -2.17
COL21A1Q96P44 AL022238.1-201ENST00000442557 355 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 AC112492.4-201ENST00000456549 352 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.52□□□□□ -2.17
COL21A1Q96P44 MTCO3P9-201ENST00000506989 781 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 RBBP4P6-201ENST00000508098 202 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 RNU1-86P-201ENST00000516108 154 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 RNU1-107P-201ENST00000516617 154 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.52□□□□□ -2.17
COL21A1Q96P44 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.52□□□□□ -2.17
COL21A1Q96P44 PIGPP4-201ENST00000584447 307 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 BNIP3P25-201ENST00000596023 559 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 CYP2C61P-201ENST00000604072 290 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 AL359821.1-201ENST00000605519 182 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.52□□□□□ -2.17
COL21A1Q96P44 AC068944.2-201ENST00000610373 403 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.52□□□□□ -2.17
COL21A1Q96P44 AL133173.2-201ENST00000614270 90 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 AL158063.1-201ENST00000615349 536 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 AL603839.4-201ENST00000624658 1005 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 U6.114-201ENST00000636407 96 ntBASIC1.52□□□□□ -2.17
COL21A1Q96P44 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
COL21A1Q96P44 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.52□□□□□ -2.17
COL21A1Q96P44 AC027514.1-201ENST00000588561 1603 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 MTND4P23-201ENST00000447723 1363 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 FGF7P2-201ENST00000332473 296 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 RNU6-1097P-201ENST00000363586 107 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 RNU4-42P-201ENST00000364738 142 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 RNU6-169P-201ENST00000365336 107 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 SNORD116-9-201ENST00000384000 95 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 SNORD116-3-201ENST00000384287 95 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 SNORD116-7-201ENST00000384404 95 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 SNORD116-5-201ENST00000384462 95 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 MIR1283-2-201ENST00000408621 87 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 RPS3AP3-201ENST00000411933 242 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 OR6C66P-201ENST00000414917 930 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AL358453.1-201ENST00000422522 250 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.51□□□□□ -2.17
COL21A1Q96P44 Z82205.1-201ENST00000428456 297 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 MTATP6P16-201ENST00000434543 526 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 MTCO2P16-201ENST00000436962 677 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC022447.4-201ENST00000504053 364 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC074344.1-201ENST00000512823 224 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 Y_RNA.695-201ENST00000516715 107 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 RNU2-46P-201ENST00000517038 113 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC109479.2-201ENST00000517842 174 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC090572.1-201ENST00000519251 160 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
COL21A1Q96P44 TRAV32-201ENST00000553993 340 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC137800.2-201ENST00000574375 120 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 MIR4713-201ENST00000582691 75 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC097065.2-201ENST00000608159 533 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC004908.3-201ENST00000610248 625 ntBASIC1.51□□□□□ -2.17
COL21A1Q96P44 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 RNU1-58P-201ENST00000362413 163 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 Y_RNA.77-201ENST00000362962 107 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 SNORA62.1-201ENST00000364287 154 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 SNORD115-7-201ENST00000365306 82 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 RNU6-108P-201ENST00000365558 107 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
COL21A1Q96P44 RNU6-297P-201ENST00000384636 107 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 Y_RNA.576-201ENST00000384781 102 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 RPL21P1-201ENST00000399532 476 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 HMGN1P14-201ENST00000412459 517 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 C1DP2-201ENST00000418167 426 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 BTF3P4-201ENST00000418852 495 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 RPS15AP10-201ENST00000432472 382 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 GPR143P-201ENST00000434155 205 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 AL031667.1-201ENST00000440222 725 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 AC007969.2-201ENST00000441891 191 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 RPL39P29-201ENST00000447779 157 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 RPL31P3-201ENST00000458430 332 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 RNA5SP269-201ENST00000459032 137 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 RNU6-333P-201ENST00000459117 107 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 RAP1BP2-201ENST00000478270 544 ntBASIC1.5□□□□□ -2.17
COL21A1Q96P44 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.5□□□□□ -2.17
COL21A1Q96P44 AC104806.1-201ENST00000508720 308 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms