Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 GSTA11P-201ENST00000452866 669 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC090525.1-201ENST00000479116 478 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC138Q96M89 RN7SKP43-201ENST00000516173 320 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC109329.2-201ENST00000519658 482 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC016256.1-201ENST00000547971 354 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC138Q96M89 AL713866.2-201ENST00000603579 219 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC009233.1-201ENST00000616477 371 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC138Q96M89 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.96□□□□□ -1.93
CCDC138Q96M89 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
CCDC138Q96M89 AL365361.1-201ENST00000566942 3481 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 MIR22-201ENST00000362190 85 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 RNA5SP240-201ENST00000365355 128 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 RNU6-784P-201ENST00000384330 106 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 Y_RNA.482-201ENST00000384377 111 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 Y_RNA.500-201ENST00000384466 111 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC138Q96M89 SNORA26.3-201ENST00000391119 136 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 SNORD88.1-201ENST00000408684 91 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AC003685.2-201ENST00000422795 395 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AC093019.1-201ENST00000443135 252 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AL353752.1-201ENST00000454946 260 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 RPS3P1-201ENST00000456781 192 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC138Q96M89 RPS27AP9-201ENST00000477681 438 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC138Q96M89 RPPH1-2P-201ENST00000516688 293 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AC105029.1-201ENST00000520250 669 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AC021231.3-201ENST00000558497 370 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC138Q96M89 AC060766.3-201ENST00000591442 263 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AL034555.1-201ENST00000604816 211 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AL138963.2-201ENST00000605137 226 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AC008121.3-201ENST00000618726 433 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 SNORA43.4-201ENST00000629559 138 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AC099654.5-201ENST00000636479 350 ntBASIC2.96□□□□□ -1.94
CCDC138Q96M89 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC138Q96M89 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC138Q96M89 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC138Q96M89 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CCDC138Q96M89 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC138Q96M89 AL161788.1-201ENST00000441805 169 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC138Q96M89 SNORD5.1-201ENST00000458800 75 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 AC008885.1-201ENST00000514930 301 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 RNA5SP76-201ENST00000516277 87 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 RNU6-1016P-201ENST00000516689 94 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 RN7SKP272-201ENST00000516988 232 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 RNU6-586P-201ENST00000517265 104 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC138Q96M89 IMMP1LP2-201ENST00000552954 492 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 FGF7P1-201ENST00000582820 288 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 AC023043.3-201ENST00000593113 385 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 AC090517.3-201ENST00000625170 141 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC138Q96M89 AC135776.4-201ENST00000624300 1904 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 AL035425.3-201ENST00000564206 4996 ntBASIC2.95□□□□□ -1.94
CCDC138Q96M89 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC138Q96M89 snoU2_19.1-201ENST00000362361 80 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 RNU6-596P-201ENST00000365395 98 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 MIR29B2-201ENST00000385055 81 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 SNORA48.2-201ENST00000390926 124 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 AL591034.2-201ENST00000402839 359 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 AC096664.2-201ENST00000411843 406 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 USP9YP30-201ENST00000430729 455 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC138Q96M89 Y_RNA.635-201ENST00000459041 101 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 RN7SL633P-201ENST00000488974 297 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
CCDC138Q96M89 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC138Q96M89 RNU6-507P-201ENST00000516045 100 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 RNU6-567P-201ENST00000516746 107 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 SNORA31.16-201ENST00000516773 139 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC138Q96M89 AC005000.2-201ENST00000605468 310 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 AC063943.3-201ENST00000615562 356 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 AL450472.1-202ENST00000637286 180 ntBASIC2.94□□□□□ -1.94
CCDC138Q96M89 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC138Q96M89 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC138Q96M89 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC138Q96M89 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC138Q96M89 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC138Q96M89 AC073325.2-201ENST00000339545 159 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 SNORA71.1-201ENST00000364523 117 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 RNU1-109P-201ENST00000383960 147 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 RNU6-1032P-201ENST00000384100 107 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 RNU6-601P-201ENST00000384540 107 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC138Q96M89 EIF4EP2-201ENST00000422816 654 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 AL590556.1-201ENST00000423231 483 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC138Q96M89 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 MIR3923-201ENST00000579521 83 ntBASIC2.93□□□□□ -1.94
CCDC138Q96M89 MIR4273-201ENST00000582824 84 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms