Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RAP1BP3-201ENST00000407180 549 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 Y_RNA.598-201ENST00000410480 95 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.64□□□□□ -2.15
USP47Q96K76 USP9YP18-201ENST00000425912 695 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 MTATP6P16-201ENST00000434543 526 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.64□□□□□ -2.15
USP47Q96K76 MTND3P25-201ENST00000509243 135 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
USP47Q96K76 RNU2-46P-201ENST00000517038 113 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.64□□□□□ -2.15
USP47Q96K76 MIR151B-201ENST00000584249 96 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 AL078605.1-201ENST00000603529 500 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 AL121992.2-201ENST00000606262 256 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 AC091304.9-201ENST00000612091 226 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 RNU6-179P-201ENST00000363350 107 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 RNU6-169P-201ENST00000365336 107 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.63□□□□□ -2.15
USP47Q96K76 AC000111.3-201ENST00000433478 193 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 AC104850.1-201ENST00000435940 476 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 RNA5SP57-201ENST00000459463 123 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.63□□□□□ -2.15
USP47Q96K76 RPL30P1-201ENST00000488676 339 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.63□□□□□ -2.15
USP47Q96K76 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.63□□□□□ -2.15
USP47Q96K76 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.63□□□□□ -2.15
USP47Q96K76 SCARNA24.1-201ENST00000516465 137 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 RN7SKP256-201ENST00000517201 314 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 AL451064.1-201ENST00000607718 471 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 MIR6788-201ENST00000618842 66 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 AL159153.1-201ENST00000619688 317 ntBASIC1.63□□□□□ -2.15
USP47Q96K76 U8.3-201ENST00000363321 132 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
USP47Q96K76 Y_RNA.576-201ENST00000384781 102 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 MIR29B2-201ENST00000385055 81 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 AL033519.2-201ENST00000403958 392 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 Y_RNA.597-201ENST00000410463 100 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 AC013410.2-201ENST00000422627 201 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.62□□□□□ -2.15
USP47Q96K76 RPL39P29-201ENST00000447779 157 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 MTND1P18-201ENST00000448191 573 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 AL122001.1-201ENST00000457027 370 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.62□□□□□ -2.15
USP47Q96K76 RPL30P6-201ENST00000475925 342 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 AC116562.3-201ENST00000506136 177 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.62□□□□□ -2.15
USP47Q96K76 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.62□□□□□ -2.15
USP47Q96K76 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.62□□□□□ -2.15
USP47Q96K76 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.62□□□□□ -2.15
USP47Q96K76 AC068587.5-201ENST00000528506 175 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.62□□□□□ -2.15
USP47Q96K76 AC234772.3-201ENST00000602277 528 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 AC083806.3-201ENST00000614016 455 ntBASIC1.62□□□□□ -2.15
USP47Q96K76 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USP47Q96K76 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
USP47Q96K76 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.62□□□□□ -2.15
USP47Q96K76 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USP47Q96K76 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USP47Q96K76 RNU6-78P-201ENST00000362897 107 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 RNU6-527P-201ENST00000363425 104 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 RNU6-1164P-201ENST00000364428 107 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 RNU4-91P-201ENST00000364778 135 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 RNU6-116P-201ENST00000384042 109 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 SNORD14D-201ENST00000384390 87 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 Y_RNA.560-201ENST00000384689 102 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 MIR597-201ENST00000384968 97 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 RNA5SP465-201ENST00000391195 109 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 BTF3L4P2-201ENST00000392798 346 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 OR9R1P-201ENST00000412200 877 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AC010099.3-201ENST00000423896 409 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AL591043.1-201ENST00000432461 424 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.61□□□□□ -2.15
USP47Q96K76 MTND2P29-201ENST00000438595 412 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.61□□□□□ -2.15
USP47Q96K76 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.61□□□□□ -2.15
USP47Q96K76 RAP1BP2-201ENST00000478270 544 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AC104806.1-201ENST00000508720 308 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 MTCYBP40-201ENST00000509390 1135 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 FABP5P5-201ENST00000515537 406 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 RNU6-685P-201ENST00000517088 95 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.61□□□□□ -2.15
USP47Q96K76 MIR548AB-201ENST00000584917 84 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 BNIP3P25-201ENST00000596023 559 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AL022161.1-201ENST00000604390 213 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AL022345.1-201ENST00000607292 135 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.61□□□□□ -2.15
USP47Q96K76 AC024933.1-201ENST00000608472 348 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AC004223.4-201ENST00000612426 332 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 AC009159.2-201ENST00000617603 606 ntBASIC1.61□□□□□ -2.15
USP47Q96K76 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
USP47Q96K76 RNU5E-7P-201ENST00000365290 117 ntBASIC1.6□□□□□ -2.15
USP47Q96K76 MIR544A-201ENST00000384855 91 ntBASIC1.6□□□□□ -2.15
USP47Q96K76 AC068050.1-201ENST00000394891 380 ntBASIC1.6□□□□□ -2.15
USP47Q96K76 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.6□□□□□ -2.15
USP47Q96K76 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.6□□□□□ -2.15
USP47Q96K76 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
USP47Q96K76 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.6□□□□□ -2.15
USP47Q96K76 AC073539.2-201ENST00000597113 165 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms