Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RN7SKP177-201ENST00000410567 355 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 RNU6-1199P-201ENST00000411249 104 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.3□□□□□ -1.72
IFT43Q96FT9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.3□□□□□ -1.72
IFT43Q96FT9 AC091179.3-201ENST00000474761 144 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 S100A11P1-201ENST00000477525 312 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 RN7SL691P-201ENST00000494487 301 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.3□□□□□ -1.72
IFT43Q96FT9 AC025554.1-201ENST00000505641 188 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.3□□□□□ -1.72
IFT43Q96FT9 RNA5SP519-201ENST00000516480 119 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 RNA5SP73-201ENST00000516744 108 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.3□□□□□ -1.72
IFT43Q96FT9 CYP4A27P-201ENST00000567218 190 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 MIR3145-201ENST00000580727 82 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 FAM27D1-201ENST00000612308 341 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 AC091932.3-201ENST00000624223 323 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 RNA5SP196-201ENST00000625967 102 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.3□□□□□ -1.72
IFT43Q96FT9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.3□□□□□ -1.72
IFT43Q96FT9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
IFT43Q96FT9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
IFT43Q96FT9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
IFT43Q96FT9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
IFT43Q96FT9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
IFT43Q96FT9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
IFT43Q96FT9 AL672296.1-201ENST00000427780 2158 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNU1-62P-201ENST00000362599 164 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 Y_RNA.75-201ENST00000362927 97 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 Y_RNA.121-201ENST00000363309 113 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNU6-799P-201ENST00000363567 107 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 Y_RNA.215-201ENST00000364204 112 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNU1-64P-201ENST00000365443 163 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
IFT43Q96FT9 MIR549A-201ENST00000385268 96 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNU6-1168P-201ENST00000390831 104 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 U3.26-201ENST00000391236 204 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 MIR320B2-201ENST00000408479 138 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNA5SP317-201ENST00000410176 116 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNA5SP311-201ENST00000411290 116 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RPL23AP46-201ENST00000438548 490 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 AL161651.1-201ENST00000440882 223 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RPS27AP9-201ENST00000477681 438 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 AC006445.2-201ENST00000510061 472 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNA5SP315-201ENST00000516340 116 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNU6-155P-201ENST00000516347 100 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNA5SP49-201ENST00000516450 115 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 RNA5SP312-201ENST00000517068 116 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 SUMO2P18-201ENST00000518873 252 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.29□□□□□ -1.72
IFT43Q96FT9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.29□□□□□ -1.72
IFT43Q96FT9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 MIR3136-201ENST00000583498 78 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 MIR432-201ENST00000606207 94 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
IFT43Q96FT9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.29□□□□□ -1.72
IFT43Q96FT9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.29□□□□□ -1.72
IFT43Q96FT9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
IFT43Q96FT9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
IFT43Q96FT9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
IFT43Q96FT9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
IFT43Q96FT9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.28□□□□□ -1.72
IFT43Q96FT9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
IFT43Q96FT9 RNU6-1272P-201ENST00000362776 107 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 RNU4-84P-201ENST00000364200 139 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 RNU1-13P-201ENST00000384499 162 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 SNORA22C-201ENST00000384614 134 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 AL138878.1-201ENST00000405131 347 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 Z98941.1-201ENST00000407764 100 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 RNU2-54P-201ENST00000410299 190 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 AL591419.1-201ENST00000427423 339 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.28□□□□□ -1.72
IFT43Q96FT9 RNA5SP310-201ENST00000459084 116 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.28□□□□□ -1.72
IFT43Q96FT9 AIG1P1-201ENST00000503376 148 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 MIR3609-201ENST00000582661 80 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 AL008718.3-201ENST00000610217 321 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 SNORD98-201ENST00000636377 67 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 AC106871.1-201ENST00000568324 3102 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 AC004944.1-201ENST00000517807 3059 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 AL133383.2-201ENST00000622958 2336 ntBASIC4.28□□□□□ -1.72
IFT43Q96FT9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
IFT43Q96FT9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.27□□□□□ -1.73
IFT43Q96FT9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
IFT43Q96FT9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
IFT43Q96FT9 Y_RNA.586-201ENST00000391146 98 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 MIR208B-201ENST00000401172 77 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 RN7SKP53-201ENST00000411337 315 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 BTF3P11-201ENST00000426582 477 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.27□□□□□ -1.73
IFT43Q96FT9 RPS15AP5-201ENST00000436276 388 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 IFNA11P-201ENST00000446352 526 ntBASIC4.27□□□□□ -1.73
IFT43Q96FT9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
IFT43Q96FT9 DEFB117-201ENST00000602356 141 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms