Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL035666.1-201ENST00000446195 348 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 AC022447.4-201ENST00000504053 364 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 AC021146.2-201ENST00000504736 556 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 RNU6-410P-201ENST00000517006 107 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 AC115990.1-201ENST00000526957 301 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 AC104073.3-201ENST00000610942 955 ntBASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
ECHDC3Q96DC8 CBX3P1-201ENST00000325243 554 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 RNU6-553P-201ENST00000364047 96 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 Y_RNA.324-201ENST00000365165 102 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 RNU6-108P-201ENST00000365558 107 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 RNU6-116P-201ENST00000384042 109 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 MIR454-201ENST00000390180 115 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 C1DP2-201ENST00000418167 426 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 MTND2P4-201ENST00000445034 1004 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 AC079781.2-201ENST00000446424 169 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 GAPDHP17-201ENST00000449858 1001 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 AC013470.1-201ENST00000453438 462 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 RNVU1-2-201ENST00000516326 135 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 MIR3682-201ENST00000581338 84 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 AC098848.2-201ENST00000588023 330 ntBASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.46□□□□□ -2.18
ECHDC3Q96DC8 RNU6-527P-201ENST00000363425 104 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 RNA5SP493-201ENST00000364115 91 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 RNU6-715P-201ENST00000365204 103 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 Y_RNA.332-201ENST00000365271 113 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 BTF3P4-201ENST00000418852 495 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 MTND5P25-201ENST00000430499 799 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 GPR143P-201ENST00000434155 205 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 HMGB1P18-201ENST00000438801 619 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 MTND1P30-201ENST00000441241 901 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 AC079448.1-201ENST00000449377 373 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 RNU7-95P-201ENST00000459222 64 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 RNU6-232P-201ENST00000517144 64 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 ZNF321P-202ENST00000550843 495 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 AL512598.1-201ENST00000610158 273 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 AC097372.5-201ENST00000623665 376 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 AC022513.1-201ENST00000624512 117 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
ECHDC3Q96DC8 MIR424-201ENST00000362227 98 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 U8.1-201ENST00000362843 134 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 RNU6-1097P-201ENST00000363586 107 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 SNORD114-6-201ENST00000364393 72 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 RNU6-160P-201ENST00000384591 107 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 Y_RNA.560-201ENST00000384689 102 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AC068050.1-201ENST00000394891 380 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 RN7SKP51-201ENST00000410781 304 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 CYCSP46-201ENST00000423569 204 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 RNU7-125P-201ENST00000458760 62 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 MTCO2P6-201ENST00000463134 685 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 Y_RNA.675-201ENST00000516389 149 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AC023050.3-201ENST00000541142 333 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AC008015.1-201ENST00000555505 465 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 SUB1P4-201ENST00000566062 339 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 BNIP3P16-201ENST00000589779 534 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 VN1R80P-201ENST00000597126 338 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 VN1R107P-201ENST00000601784 209 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AL034555.1-201ENST00000604816 211 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AL360219.1-201ENST00000610230 366 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 AP000560.1-201ENST00000624150 1937 ntBASIC1.44□□□□□ -2.18
ECHDC3Q96DC8 MIR378A-201ENST00000362177 66 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 RNY4P34-201ENST00000364779 95 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 RNU6-142P-201ENST00000384019 107 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 HMGN1P14-201ENST00000412459 517 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AC007098.1-201ENST00000420122 367 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AL596276.1-201ENST00000434465 418 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AL162395.1-201ENST00000457882 422 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AC132942.1-201ENST00000486753 483 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 TRAV32-201ENST00000553993 340 ntBASIC1.43□□□□□ -2.18
ECHDC3Q96DC8 AL161670.1-201ENST00000554348 137 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms