Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.38□□□□□ -2.19
CPNE4Q96A23 RNU7-182P-201ENST00000459009 62 ntBASIC1.38□□□□□ -2.19
CPNE4Q96A23 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.38□□□□□ -2.19
CPNE4Q96A23 MTCO3P28-201ENST00000513351 515 ntBASIC1.38□□□□□ -2.19
CPNE4Q96A23 AC012414.6-201ENST00000568241 401 ntBASIC1.38□□□□□ -2.19
CPNE4Q96A23 AC078795.2-201ENST00000602835 1252 ntBASIC1.38□□□□□ -2.19
CPNE4Q96A23 MIR98-201ENST00000606724 119 ntBASIC1.38□□□□□ -2.19
CPNE4Q96A23 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.38□□□□□ -2.19
CPNE4Q96A23 AC068944.2-201ENST00000610373 403 ntBASIC1.38□□□□□ -2.19
CPNE4Q96A23 SEPT14P19-203ENST00000633205 211 ntBASIC1.38□□□□□ -2.19
CPNE4Q96A23 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CPNE4Q96A23 RNU6-1287P-201ENST00000362914 107 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 RNU6-715P-201ENST00000365204 103 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 SNORD14D-201ENST00000384390 87 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 RNU6-1060P-201ENST00000384664 107 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 RNY3P10-201ENST00000384764 102 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 MIR1-2-201ENST00000384961 85 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 RNA5SP213-201ENST00000391031 106 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 MIR1262-201ENST00000408276 93 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 MTND2P18-201ENST00000419962 1030 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 RPS15AP10-201ENST00000432472 382 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 AC079448.1-201ENST00000449377 373 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 GMFBP1-201ENST00000467831 427 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 RPL30P12-201ENST00000474666 353 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 SNORA18.6-201ENST00000516792 115 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 AP002453.2-201ENST00000533503 320 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 AC103987.3-201ENST00000582071 292 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 Z94722.1-201ENST00000604328 474 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 AP001596.2-201ENST00000608410 312 ntBASIC1.37□□□□□ -2.19
CPNE4Q96A23 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
CPNE4Q96A23 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CPNE4Q96A23 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
CPNE4Q96A23 WWP1P1-201ENST00000466609 2769 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.36□□□□□ -2.19
CPNE4Q96A23 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
CPNE4Q96A23 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CPNE4Q96A23 RNU6-60P-201ENST00000364792 103 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 Y_RNA.324-201ENST00000365165 102 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 RNU4-48P-201ENST00000365559 182 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 RNU6-1029P-201ENST00000384109 107 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 RNU6-1222P-201ENST00000384615 107 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 MIR597-201ENST00000384968 97 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CPNE4Q96A23 RNA5SP501-201ENST00000410990 112 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 AC092447.3-201ENST00000426027 686 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 AC133104.1-201ENST00000429100 218 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 CBX3P6-201ENST00000430257 527 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 AL591043.1-201ENST00000432461 424 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 MTND2P4-201ENST00000445034 1004 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 RPL39P29-201ENST00000447779 157 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.36□□□□□ -2.19
CPNE4Q96A23 AC022364.2-201ENST00000457963 554 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.36□□□□□ -2.19
CPNE4Q96A23 MTND2P33-201ENST00000506452 1031 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 PTP4A1P4-201ENST00000512479 322 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.36□□□□□ -2.19
CPNE4Q96A23 Y_RNA.675-201ENST00000516389 149 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 RNA5SP503-201ENST00000517047 117 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.36□□□□□ -2.19
CPNE4Q96A23 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.36□□□□□ -2.19
CPNE4Q96A23 MIR4703-201ENST00000577728 79 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 CYP2C61P-201ENST00000604072 290 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 AC008945.2-201ENST00000606056 604 ntBASIC1.36□□□□□ -2.19
CPNE4Q96A23 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CPNE4Q96A23 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
CPNE4Q96A23 snoU2_19.1-201ENST00000362361 80 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 RNU6-1285P-201ENST00000363480 105 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 RNU6-457P-201ENST00000363999 107 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 AL049545.1-201ENST00000401856 572 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.35□□□□□ -2.19
CPNE4Q96A23 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.35□□□□□ -2.19
CPNE4Q96A23 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.35□□□□□ -2.19
CPNE4Q96A23 PIGFP2-201ENST00000421400 651 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CPNE4Q96A23 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.35□□□□□ -2.19
CPNE4Q96A23 MTND1P18-201ENST00000448191 573 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 MTCO2P6-201ENST00000463134 685 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.35□□□□□ -2.19
CPNE4Q96A23 AC114801.2-201ENST00000503825 781 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.35□□□□□ -2.19
CPNE4Q96A23 LRRC34P2-201ENST00000514850 553 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 RNU6-1178P-201ENST00000516674 107 ntBASIC1.35□□□□□ -2.19
CPNE4Q96A23 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms