Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 MIR208B-201ENST00000401172 77 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 SNORA11-201ENST00000408789 128 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 RNU6-847P-201ENST00000411115 108 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF34Q969K3 AIMP1P2-201ENST00000425294 312 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 SDAD1P3-201ENST00000427380 333 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 RPS15AP7-201ENST00000439294 405 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF34Q969K3 SNORA84-201ENST00000459229 133 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 RPL21P129-201ENST00000491732 478 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 SCARNA14-201ENST00000516903 136 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 RNA5SP54-201ENST00000516951 92 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 IGKV2-23-201ENST00000518729 323 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 BRDTP1-201ENST00000605735 677 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 RNU1-30P-201ENST00000606575 163 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 AC107294.3-201ENST00000609211 526 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 AC002064.3-201ENST00000623448 346 ntBASIC3.92□□□□□ -1.78
RNF34Q969K3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF34Q969K3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF34Q969K3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RNF34Q969K3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF34Q969K3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF34Q969K3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNF34Q969K3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF34Q969K3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF34Q969K3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF34Q969K3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RNF34Q969K3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RNF34Q969K3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF34Q969K3 Y_RNA.60-201ENST00000362831 98 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 SNORD115-8-201ENST00000363856 82 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 Y_RNA.183-201ENST00000363882 113 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 SNORD115-38-201ENST00000365037 82 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 Y_RNA.350-201ENST00000365409 98 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RNF34Q969K3 U3.19-201ENST00000390893 196 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 RNU6-159P-201ENST00000391080 106 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 AC006445.1-201ENST00000491925 405 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 AC067942.3-201ENST00000512025 362 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF34Q969K3 MIR5695-201ENST00000579717 85 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNF34Q969K3 AL162713.1-201ENST00000604480 262 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF34Q969K3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.91□□□□□ -1.78
RNF34Q969K3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF34Q969K3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.9□□□□□ -1.78
RNF34Q969K3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF34Q969K3 Y_RNA.14-201ENST00000362415 103 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 Y_RNA.257-201ENST00000364596 102 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 MIR215-201ENST00000384858 110 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 MIR10B-201ENST00000385011 110 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RNF34Q969K3 RNA5SP424-201ENST00000390988 115 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 RNU6-1093P-201ENST00000391194 107 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 AC091286.1-201ENST00000431233 461 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 AL445584.1-201ENST00000431451 330 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 AC096638.1-201ENST00000444678 216 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF34Q969K3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.9□□□□□ -1.79
RNF34Q969K3 AL121594.1-201ENST00000475906 575 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 RPL7P47-201ENST00000497299 556 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 UBL5P4-201ENST00000562584 236 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 AC011471.1-201ENST00000585766 187 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 AC244505.7-201ENST00000599675 272 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 AC011476.5-201ENST00000615594 130 ntBASIC3.9□□□□□ -1.79
RNF34Q969K3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RNF34Q969K3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF34Q969K3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RNF34Q969K3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF34Q969K3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RNF34Q969K3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
RNF34Q969K3 AL161912.2-201ENST00000565707 3007 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 RNU6-280P-201ENST00000364145 104 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RNF34Q969K3 MIR23B-201ENST00000384832 97 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 SNORD78.2-201ENST00000391076 69 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 CBX3P9-201ENST00000402326 552 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF34Q969K3 Z98949.2-201ENST00000440996 144 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF34Q969K3 TRBVB-201ENST00000477100 408 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 RPL31P41-201ENST00000477967 372 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 AC025465.3-201ENST00000510570 311 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 RNA5SP112-201ENST00000515937 99 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF34Q969K3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF34Q969K3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
RNF34Q969K3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF34Q969K3 AC136932.1-201ENST00000574771 208 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF34Q969K3 AC005520.5-201ENST00000613926 164 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.89□□□□□ -1.79
RNF34Q969K3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms