Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 Y_RNA.7-201ENST00000362352 102 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 RNU6-727P-201ENST00000363592 107 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 CBX3P9-201ENST00000402326 552 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 AC096649.2-201ENST00000416186 393 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 PTGES3P4-201ENST00000426243 356 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 HMGN2P16-201ENST00000456802 261 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 AC091167.1-201ENST00000492017 396 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 MRPL49P2-201ENST00000521066 465 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 AC006380.1-201ENST00000603598 186 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 RNU6-91P-201ENST00000607774 107 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 MIR3653-201ENST00000625572 110 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 AC140479.6-201ENST00000633535 357 ntBASIC4.34□□□□□ -1.71
SCG3Q8WXD2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SCG3Q8WXD2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
SCG3Q8WXD2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SCG3Q8WXD2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SCG3Q8WXD2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 RNA5SP388-201ENST00000362584 119 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 RNU6-312P-201ENST00000364629 107 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 RNU6-748P-201ENST00000384648 107 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 RNU6-19P-201ENST00000384718 107 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 MIR1193-201ENST00000408109 78 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 snoU13.28-201ENST00000459235 104 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 AC103975.1-201ENST00000482506 483 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 AC146944.2-203ENST00000502493 354 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 AL592156.1-201ENST00000508758 304 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 AC139495.1-202ENST00000513164 354 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 SUMO2P18-201ENST00000518873 252 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 AC091152.3-201ENST00000604227 325 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 AC084757.4-201ENST00000616350 526 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 AL445567.2-201ENST00000618935 498 ntBASIC4.33□□□□□ -1.72
SCG3Q8WXD2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SCG3Q8WXD2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCG3Q8WXD2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SCG3Q8WXD2 MIR383-201ENST00000362257 73 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 MIR331-201ENST00000362302 94 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 RNA5SP175-201ENST00000364275 119 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 SNORD116-18-201ENST00000383961 92 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AL591034.1-201ENST00000407447 340 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AC023141.4-201ENST00000412031 328 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.32□□□□□ -1.72
SCG3Q8WXD2 RN7SKP21-201ENST00000516503 220 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 RNA5SP73-201ENST00000516744 108 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AP003730.1-201ENST00000524605 285 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AC006064.5-201ENST00000541782 248 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AL360157.1-201ENST00000565962 87 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AC009127.3-201ENST00000570531 403 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AC020914.4-201ENST00000597690 277 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AL034555.1-201ENST00000604816 211 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 MIR432-201ENST00000606207 94 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 MIR6076-201ENST00000617521 113 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 MIR7702-201ENST00000621931 59 ntBASIC4.32□□□□□ -1.72
SCG3Q8WXD2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SCG3Q8WXD2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 Y_RNA.121-201ENST00000363309 113 ntBASIC4.31□□□□□ -1.72
SCG3Q8WXD2 Y_RNA.238-201ENST00000364441 102 ntBASIC4.31□□□□□ -1.72
SCG3Q8WXD2 Y_RNA.329-201ENST00000365209 107 ntBASIC4.31□□□□□ -1.72
SCG3Q8WXD2 RNU6-1264P-201ENST00000383891 107 ntBASIC4.31□□□□□ -1.72
SCG3Q8WXD2 RNU6-1117P-201ENST00000384525 104 ntBASIC4.31□□□□□ -1.72
SCG3Q8WXD2 MIR1179-201ENST00000408703 91 ntBASIC4.31□□□□□ -1.72
SCG3Q8WXD2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 RNU2-12P-201ENST00000517216 168 ntBASIC4.31□□□□□ -1.72
SCG3Q8WXD2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 MIR3160-1-201ENST00000577972 85 ntBASIC4.31□□□□□ -1.72
SCG3Q8WXD2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 AC093908.1-201ENST00000623125 8092 ntBASIC4.31□□□□□ -1.72
SCG3Q8WXD2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.31□□□□□ -1.72
SCG3Q8WXD2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms