Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 CYCSP48-201ENST00000417124 323 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 AC097463.2-201ENST00000421074 142 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 MICF-203ENST00000432679 129 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 RN7SL633P-201ENST00000488974 297 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 RPL22P13-201ENST00000493291 347 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 AC004832.5-201ENST00000608677 401 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGB4Q8WW32 Z75746.1-201ENST00000440243 2080 ntBASIC2.86□□□□□ -1.95
HMGB4Q8WW32 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.40-201ENST00000362645 93 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 RNU6-784P-201ENST00000384330 106 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 SNORD116-29-201ENST00000384516 83 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 RPL21P3-201ENST00000395517 478 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 OOSP1P1-201ENST00000423265 274 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 EEF1B2P7-201ENST00000451177 676 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 snoU13.14-201ENST00000459372 104 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AC146507.2-201ENST00000460608 476 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 RN7SL75P-201ENST00000461926 281 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 SNORA25.11-201ENST00000515935 105 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 RNA5SP112-201ENST00000515937 99 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AC109446.1-201ENST00000566172 220 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 MTCO3P13-201ENST00000577757 781 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AC073410.2-201ENST00000603240 332 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AC009229.3-201ENST00000608056 282 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 MTND4LP32-201ENST00000636111 270 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGB4Q8WW32 AC009541.1-201ENST00000438279 2662 ntBASIC2.85□□□□□ -1.95
HMGB4Q8WW32 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AC093831.2-201ENST00000624393 3427 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 SNORD50.1-201ENST00000362987 71 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 RNU6-486P-201ENST00000363116 107 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.123-201ENST00000363338 102 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 Y_RNA.404-201ENST00000383978 102 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 RNU1-57P-201ENST00000384491 166 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 MIR186-201ENST00000384988 86 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 SNORA75.4-201ENST00000391278 119 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AL138827.1-201ENST00000402666 306 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AL591034.2-201ENST00000402839 359 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 RN7SKP61-201ENST00000410642 295 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 RNA5SP508-201ENST00000411327 119 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 RNU6-1304P-201ENST00000411374 106 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AC009969.1-201ENST00000438726 172 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 SNORD19B-201ENST00000459623 84 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 RPS26P21-201ENST00000475397 348 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 RPL7P42-201ENST00000481005 679 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 RN7SL283P-201ENST00000489055 303 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AC092185.1-201ENST00000491371 97 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AC103810.1-201ENST00000579873 453 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 MIR5690-201ENST00000583739 73 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 SNORA43.4-201ENST00000629559 138 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AL669831.3-213ENST00000636676 183 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HMGB4Q8WW32 AC138915.1-201ENST00000565427 1685 ntBASIC2.84□□□□□ -1.95
HMGB4Q8WW32 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 RNU6-859P-201ENST00000362728 107 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 RNU1-112P-201ENST00000364401 164 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 MTCYBP4-201ENST00000401524 249 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 EIF4EP2-201ENST00000422816 654 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 EIF4EP4-201ENST00000424916 578 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AC078809.1-201ENST00000427601 140 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AC244670.1-201ENST00000436879 112 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 RPS15AP7-201ENST00000439294 405 ntBASIC2.83□□□□□ -1.96
HMGB4Q8WW32 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.83□□□□□ -1.96
HMGB4Q8WW32 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms