Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 MIR29B2-201ENST00000385055 81 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 RAP1BP3-201ENST00000407180 549 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 RNU6-387P-201ENST00000411331 105 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 CYCSP33-201ENST00000414485 327 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 RPL21P90-201ENST00000415692 466 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 ELOCP4-201ENST00000420090 333 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.15□□□□□ -2.23
LMX1AQ8TE12 MTATP6P16-201ENST00000434543 526 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AL357134.1-201ENST00000445848 426 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 USP9YP12-201ENST00000450481 570 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 RPS29P29-201ENST00000456396 171 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC104806.1-201ENST00000508720 308 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.23
LMX1AQ8TE12 FABP5P5-201ENST00000515537 406 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 RNU6-1129P-201ENST00000515964 104 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 RNU2-46P-201ENST00000517038 113 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC090572.1-201ENST00000519251 160 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC008015.1-201ENST00000555505 465 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.15□□□□□ -2.23
LMX1AQ8TE12 MIR3908-201ENST00000579798 126 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AL022161.1-201ENST00000604390 213 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC016925.2-201ENST00000605108 242 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC004223.4-201ENST00000612426 332 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AC007792.1-201ENST00000623023 402 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 AL161722.3-201ENST00000605789 2983 ntBASIC1.15□□□□□ -2.23
LMX1AQ8TE12 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC013410.2-201ENST00000422627 201 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 CBX3P6-201ENST00000430257 527 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC012308.1-201ENST00000451232 178 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.14□□□□□ -2.23
LMX1AQ8TE12 MTCYBP35-201ENST00000503630 1137 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC021146.2-201ENST00000504736 556 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC005178.1-201ENST00000508392 440 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.14□□□□□ -2.23
LMX1AQ8TE12 RNU6-1220P-201ENST00000517126 108 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.14□□□□□ -2.23
LMX1AQ8TE12 COPS8P3-201ENST00000526024 482 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC011604.1-201ENST00000545978 196 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC073539.2-201ENST00000597113 165 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 CYP2C61P-201ENST00000604072 290 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AL121992.2-201ENST00000606262 256 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AL050303.3-201ENST00000613704 284 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC009159.2-201ENST00000617603 606 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 AC138649.3-201ENST00000622154 254 ntBASIC1.14□□□□□ -2.23
LMX1AQ8TE12 MTND4P4-201ENST00000439033 1366 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
LMX1AQ8TE12 RNU6-78P-201ENST00000362897 107 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 SNORD115-3-201ENST00000363100 82 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 RNU6-1285P-201ENST00000363480 105 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 RNU11-3P-201ENST00000391111 133 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 RNU2-8P-201ENST00000410727 190 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 RNA5SP501-201ENST00000410990 112 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LMX1AQ8TE12 RPS15AP10-201ENST00000432472 382 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC000111.3-201ENST00000433478 193 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.13□□□□□ -2.23
LMX1AQ8TE12 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.13□□□□□ -2.23
LMX1AQ8TE12 ZNF114P1-201ENST00000453500 292 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 RNU6-333P-201ENST00000459117 107 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 RPL30P6-201ENST00000475925 342 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC087343.1-201ENST00000477341 475 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC114801.2-201ENST00000503825 781 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 MTND3P25-201ENST00000509243 135 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.13□□□□□ -2.23
LMX1AQ8TE12 SCARNA24.1-201ENST00000516465 137 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC008269.2-201ENST00000561915 1105 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 MIR5692A1-201ENST00000580523 69 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC005771.1-201ENST00000585581 349 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC012065.4-201ENST00000602445 679 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC078795.2-201ENST00000602835 1252 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC027449.1-201ENST00000608890 407 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC091304.6-201ENST00000619761 202 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.13□□□□□ -2.23
LMX1AQ8TE12 Z69720.2-201ENST00000624755 279 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 U4.7-201ENST00000638126 106 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 MTND5P17-201ENST00000418405 1603 ntBASIC1.13□□□□□ -2.23
LMX1AQ8TE12 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.13□□□□□ -2.23
LMX1AQ8TE12 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 CBX3P1-201ENST00000325243 554 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LMX1AQ8TE12 MIR424-201ENST00000362227 98 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 SNORD56.1-201ENST00000362913 68 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 Y_RNA.99-201ENST00000363138 105 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 SNORD115-7-201ENST00000365306 82 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 RNU6-641P-201ENST00000384006 107 ntBASIC1.12□□□□□ -2.23
LMX1AQ8TE12 Y_RNA.576-201ENST00000384781 102 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms