Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AP003122.4-201ENST00000530980 758 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AP002453.2-201ENST00000533503 320 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL132657.2-201ENST00000564417 358 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC137800.2-201ENST00000574375 120 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL391001.1-201ENST00000602747 715 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RPL17P51-201ENST00000605218 238 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU6-853P-201ENST00000364306 107 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.413-201ENST00000384007 102 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNA5SP100-201ENST00000410903 110 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNA5SP59-201ENST00000410922 110 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MTCO3P41-201ENST00000414801 328 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL953862.1-201ENST00000423016 168 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 ZNF886P-201ENST00000450781 723 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC005908.1-201ENST00000468701 347 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.754-201ENST00000476024 102 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU2-10P-201ENST00000516375 211 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU6-1261P-201ENST00000517194 104 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC004817.2-201ENST00000561794 651 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC018638.7-201ENST00000605836 1114 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.790-201ENST00000614282 102 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.782-201ENST00000614695 102 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC104985.3-201ENST00000623479 597 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU4-73P-201ENST00000363164 141 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR29C-201ENST00000385231 88 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.597-201ENST00000410463 100 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU6-733P-201ENST00000410759 104 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC013410.2-201ENST00000422627 201 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 CALM2P2-201ENST00000428512 440 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MTCO3P43-201ENST00000440974 771 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 OR2AQ1P-201ENST00000451972 200 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC098862.1-201ENST00000504991 413 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC109445.1-201ENST00000512356 383 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC016256.1-201ENST00000547971 354 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 VN1R82P-201ENST00000601481 356 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL513534.2-201ENST00000603836 250 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU6-87P-201ENST00000607561 108 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 Z82243.1-201ENST00000609432 473 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL355816.2-201ENST00000610049 647 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU6-968P-201ENST00000384076 107 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR604-201ENST00000384880 94 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU6-575P-201ENST00000411326 105 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MTND4P3-201ENST00000417829 541 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RPS15AP10-201ENST00000432472 382 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 SNRPEP9-201ENST00000436794 238 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 CR769776.1-201ENST00000441254 787 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 NDUFB1P2-201ENST00000449477 176 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC116655.1-201ENST00000508324 901 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU5A-4P-201ENST00000516588 111 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU6-201P-201ENST00000517100 61 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC136618.2-201ENST00000575091 400 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC063943.3-201ENST00000615562 356 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 SNORA9.1-201ENST00000362412 131 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MRPL35P1-201ENST00000404272 572 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR1207-201ENST00000408249 87 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL589872.1-201ENST00000426602 288 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MTND4P15-201ENST00000437913 1033 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC021146.2-201ENST00000504736 556 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU6-1028P-201ENST00000517164 93 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR3923-201ENST00000579521 83 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR4661-201ENST00000582720 75 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC009233.1-201ENST00000616477 371 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC093648.1-201ENST00000623546 606 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 HMGN2P39-201ENST00000398005 273 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RPL39P29-201ENST00000447779 157 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 SRRM1P2-201ENST00000464531 1192 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR4293-201ENST00000584305 78 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 BNIP3P31-201ENST00000604515 566 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL365204.3-201ENST00000612448 685 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL132822.1-201ENST00000617063 513 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR6516-201ENST00000630554 81 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 SNORA4.1-201ENST00000364263 144 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-190P-201ENST00000384154 102 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RNU6-1065P-201ENST00000384513 106 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 MIR320C1-201ENST00000408566 88 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 RPL22P18-201ENST00000417197 377 ntBASIC0.19□□□□□ -2.38
SYNE1Q8NF91 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms