Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MED28P2-201ENST00000475771 317 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 RPL17P19-201ENST00000489069 552 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 AC092185.1-201ENST00000491371 97 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 RNU6-991P-201ENST00000516168 107 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 SNORD116.3-201ENST00000517176 78 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 CBX3P8-201ENST00000532412 525 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 AC015712.3-201ENST00000559380 164 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 MIR3529-201ENST00000637713 78 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 AL513302.2-201ENST00000562313 1842 ntBASIC3.65□□□□□ -1.82
SMC1BQ8NDV3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
SMC1BQ8NDV3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SMC1BQ8NDV3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.65□□□□□ -1.82
SMC1BQ8NDV3 SNORD56.1-201ENST00000362913 68 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 SNORA18.3-201ENST00000384122 132 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 RNU6-851P-201ENST00000384565 107 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 MIR606-201ENST00000384851 96 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 RNA5SP229-201ENST00000410809 99 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 AP000275.1-201ENST00000411943 390 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 AC018865.2-201ENST00000423631 129 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 AL353997.1-201ENST00000432936 108 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 AC022447.4-201ENST00000504053 364 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 ACA59.2-201ENST00000517061 156 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 SNORA31.21-201ENST00000517180 77 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 SUB1P3-201ENST00000564581 315 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 AP001836.1-201ENST00000604675 523 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 AC019159.1-201ENST00000605094 187 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 HMGB1P24-202ENST00000615653 685 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 ZNF299P-201ENST00000406845 1804 ntBASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMC1BQ8NDV3 Y_RNA.48-201ENST00000362710 103 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 RNY1P16-201ENST00000363063 111 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 U3.6-201ENST00000363622 211 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 RNU2-52P-201ENST00000410680 190 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 AC074117.2-201ENST00000417130 397 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 RPS29P27-201ENST00000463711 170 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 AC108210.2-201ENST00000503681 201 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 RNU6-327P-201ENST00000516270 127 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 SNORD19.2-201ENST00000516978 73 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 AL360085.1-201ENST00000604713 532 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 AC241585.2-209ENST00000638217 143 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 AC007496.3-201ENST00000624987 3443 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 MTND5P27-201ENST00000428871 1720 ntBASIC3.64□□□□□ -1.83
SMC1BQ8NDV3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 Y_RNA.533-201ENST00000384596 114 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 AC008267.5-201ENST00000424928 265 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 AL031183.1-201ENST00000457667 207 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 AC107626.1-201ENST00000471084 183 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 RNU6-120P-201ENST00000516077 103 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 RNU6-1045P-201ENST00000516321 107 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 RNU6-548P-201ENST00000517083 115 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 RNU6-711P-201ENST00000517255 106 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 AL355802.3-201ENST00000607571 545 ntBASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.63□□□□□ -1.83
SMC1BQ8NDV3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 RNU6-784P-201ENST00000384330 106 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 RNU6-1160P-201ENST00000384546 104 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 Y_RNA.577-201ENST00000384794 101 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 SNORD67-201ENST00000390833 111 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 RNU2-49P-201ENST00000410666 184 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 AC023141.4-201ENST00000412031 328 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 MCFD2P1-201ENST00000417812 300 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 MTND2P23-201ENST00000422990 651 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 AL441985.1-201ENST00000457727 251 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 SNORA25.10-201ENST00000515926 124 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 MIR5696-201ENST00000578474 85 ntBASIC3.62□□□□□ -1.83
SMC1BQ8NDV3 7SK.7-201ENST00000603504 247 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms