Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AL353705.4-201ENST00000449661 238 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 AMD1P1-201ENST00000457220 922 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 TRBVA-201ENST00000498804 316 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 SMURF2P1-201ENST00000514992 481 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 RNA5SP112-201ENST00000515937 99 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.89□□□□□ -1.95
USP38Q8NB14 AC243972.3-201ENST00000539655 198 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 AC009314.1-201ENST00000603871 304 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 AC024581.2-201ENST00000619986 252 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 AC244517.12-201ENST00000623581 663 ntBASIC2.89□□□□□ -1.95
USP38Q8NB14 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.89□□□□□ -1.95
USP38Q8NB14 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP38Q8NB14 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP38Q8NB14 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.88□□□□□ -1.95
USP38Q8NB14 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.88□□□□□ -1.95
USP38Q8NB14 HAUS6P2-201ENST00000433254 2404 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 AC135776.4-201ENST00000624300 1904 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 RNU6-212P-201ENST00000362642 104 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 Y_RNA.269-201ENST00000364685 89 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 U3.13-201ENST00000364804 214 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP38Q8NB14 RNU6-1013P-201ENST00000384180 107 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 Y_RNA.466-201ENST00000384294 113 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 Y_RNA.508-201ENST00000384502 114 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP38Q8NB14 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.88□□□□□ -1.95
USP38Q8NB14 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.88□□□□□ -1.95
USP38Q8NB14 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.88□□□□□ -1.95
USP38Q8NB14 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.88□□□□□ -1.95
USP38Q8NB14 PPP1R2P5-201ENST00000457256 603 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 AP000852.1-201ENST00000472460 573 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 AP001025.1-201ENST00000486139 332 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.88□□□□□ -1.95
USP38Q8NB14 AC116353.2-201ENST00000505332 712 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 RNU6-826P-201ENST00000516827 104 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.88□□□□□ -1.95
USP38Q8NB14 AC026464.5-201ENST00000562497 722 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 MIR3672-201ENST00000584290 82 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 RNU6-91P-201ENST00000607774 107 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 AC099654.14-201ENST00000638599 341 ntBASIC2.88□□□□□ -1.95
USP38Q8NB14 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
USP38Q8NB14 RNU6-486P-201ENST00000363116 107 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 Y_RNA.390-201ENST00000383932 102 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 RNU6-510P-201ENST00000391239 108 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP38Q8NB14 IFNA20P-201ENST00000436840 528 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.87□□□□□ -1.95
USP38Q8NB14 RNU6-1037P-201ENST00000459571 107 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 AC008571.1-201ENST00000467232 300 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.87□□□□□ -1.95
USP38Q8NB14 MTCO2P30-201ENST00000503662 364 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.87□□□□□ -1.95
USP38Q8NB14 COPS8P3-201ENST00000526024 482 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.87□□□□□ -1.95
USP38Q8NB14 AC004486.1-201ENST00000546846 233 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.87□□□□□ -1.95
USP38Q8NB14 AC090897.2-201ENST00000581715 130 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 MIR3117-201ENST00000584034 78 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 U4.3-201ENST00000621047 82 ntBASIC2.87□□□□□ -1.95
USP38Q8NB14 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.87□□□□□ -1.95
USP38Q8NB14 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
USP38Q8NB14 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
USP38Q8NB14 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
USP38Q8NB14 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.86□□□□□ -1.95
USP38Q8NB14 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.86□□□□□ -1.95
USP38Q8NB14 SNORD62.1-201ENST00000362541 86 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 SNORD114-1-201ENST00000362705 72 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 RNU6-562P-201ENST00000362731 107 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 Y_RNA.72-201ENST00000362894 103 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 SET-203ENST00000372688 801 ntTSL 2 BASIC2.86□□□□□ -1.95
USP38Q8NB14 RNU6-128P-201ENST00000383976 107 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 RNU6-692P-201ENST00000384496 107 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 AL590632.1-201ENST00000424289 371 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 MTCO2P3-201ENST00000442543 421 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 RPL39P29-201ENST00000447779 157 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 AP000705.1-201ENST00000454567 350 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.86□□□□□ -1.95
USP38Q8NB14 AC140059.1-201ENST00000489238 361 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 AC018437.1-201ENST00000492214 406 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 AC023141.11-201ENST00000508864 202 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 AC096745.1-201ENST00000509945 370 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 SNORA31.18-201ENST00000517043 134 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 SCARNA3-201ENST00000517097 143 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.86□□□□□ -1.95
USP38Q8NB14 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.86□□□□□ -1.95
USP38Q8NB14 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.86□□□□□ -1.95
USP38Q8NB14 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.86□□□□□ -1.95
USP38Q8NB14 AP000889.2-201ENST00000532684 490 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 AC087241.2-201ENST00000535801 324 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.86□□□□□ -1.95
USP38Q8NB14 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.86□□□□□ -1.95
USP38Q8NB14 AC090616.3-201ENST00000582184 217 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 MIR3670-2-201ENST00000582974 65 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 MIR3670-1-201ENST00000584160 65 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 MIR3670-3-201ENST00000584855 65 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 MIR3670-4-201ENST00000612260 65 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 FO624990.1-201ENST00000636373 85 ntBASIC2.86□□□□□ -1.95
USP38Q8NB14 Y_RNA.140-201ENST00000363474 103 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms