Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SET-203ENST00000372688 801 ntTSL 2 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 RNU1-57P-201ENST00000384491 166 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 RNU6-310P-201ENST00000384655 107 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 U3.19-201ENST00000390893 196 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AL603908.1-201ENST00000406098 201 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 RPL32P35-201ENST00000415214 394 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AC096644.2-201ENST00000429278 159 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 MTND2P29-201ENST00000438595 412 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 RPL21P129-201ENST00000491732 478 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 RNU6-976P-201ENST00000516086 111 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AC109329.1-201ENST00000518744 317 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AP002404.1-201ENST00000532005 451 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 MYL12BP1-201ENST00000569826 507 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 CPDP1-201ENST00000579660 283 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AL670379.2-201ENST00000604983 252 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AC091903.1-201ENST00000624322 454 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 U6.105-201ENST00000637379 88 ntBASIC3.12□□□□□ -1.91
KRT78Q8N1N4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KRT78Q8N1N4 AC026241.1-201ENST00000517873 2142 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 RNU6-238P-201ENST00000363313 106 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 RNU6-379P-201ENST00000363813 104 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 RNU6-142P-201ENST00000384019 107 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 MIR183-201ENST00000384958 110 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 RNA5SP229-201ENST00000410809 99 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.646-201ENST00000410980 101 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 RNU6-847P-201ENST00000411115 108 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 AC018865.2-201ENST00000423631 129 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 AL133396.1-201ENST00000432048 687 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 SUMO1P3-201ENST00000439961 304 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 RNA5SP217-201ENST00000515959 91 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.708-201ENST00000516950 96 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 MIR6075-201ENST00000620782 95 ntBASIC3.11□□□□□ -1.91
KRT78Q8N1N4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.11□□□□□ -1.91
KRT78Q8N1N4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 RNU6-655P-201ENST00000362858 107 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 RNU4-56P-201ENST00000364700 142 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.364-201ENST00000365532 101 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 RNU6-1040P-201ENST00000383974 107 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 MIR186-201ENST00000384988 86 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 MIR670-201ENST00000390142 98 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 SNORA48.7-201ENST00000391302 135 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 RN7SKP27-201ENST00000410684 333 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 EIF1AXP1-201ENST00000419267 435 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 USP9YP30-201ENST00000430729 455 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 Z96811.1-201ENST00000445880 108 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 RPL23AP70-201ENST00000483361 460 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC016632.1-201ENST00000503994 196 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC023141.11-201ENST00000508864 202 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC107222.1-201ENST00000510899 637 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 SNORA25.10-201ENST00000515926 124 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 RNU6-635P-201ENST00000516651 102 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 RNU6-388P-201ENST00000517012 105 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 RNU6-389P-201ENST00000517048 105 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 SCARNA3-201ENST00000517097 143 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC068657.1-201ENST00000520807 306 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC027176.1-201ENST00000560204 514 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC109446.1-201ENST00000566172 220 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.1□□□□□ -1.91
KRT78Q8N1N4 MIR4506-201ENST00000584693 77 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AL365434.2-201ENST00000607979 234 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AC006157.1-201ENST00000611750 366 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 MIR7975-201ENST00000619350 68 ntBASIC3.1□□□□□ -1.91
KRT78Q8N1N4 AL669831.3-213ENST00000636676 183 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms