Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL513043.1-201ENST00000439124 535 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 AC007969.2-201ENST00000441891 191 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 RPS3P1-201ENST00000456781 192 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 AC133134.1-201ENST00000466800 359 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 AP001025.1-201ENST00000486139 332 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 AK3P2-201ENST00000507976 429 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.9□□□□□ -1.95
VPS52Q8N1B4 PTP4A1P4-201ENST00000512479 322 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 RNA5SP148-201ENST00000516527 94 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 RNU6-1016P-201ENST00000516689 94 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 RNU6-826P-201ENST00000516827 104 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 MIR3605-201ENST00000583214 100 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS52Q8N1B4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS52Q8N1B4 RNA5SP354-201ENST00000391247 136 ntBASIC2.89□□□□□ -1.95
VPS52Q8N1B4 MIR1261-201ENST00000408659 82 ntBASIC2.89□□□□□ -1.95
VPS52Q8N1B4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS52Q8N1B4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS52Q8N1B4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS52Q8N1B4 SNORD5.1-201ENST00000458800 75 ntBASIC2.89□□□□□ -1.95
VPS52Q8N1B4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS52Q8N1B4 RPL23AP49-201ENST00000492925 468 ntBASIC2.89□□□□□ -1.95
VPS52Q8N1B4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS52Q8N1B4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.89□□□□□ -1.95
VPS52Q8N1B4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS52Q8N1B4 AC010186.2-204ENST00000537668 439 ntBASIC2.89□□□□□ -1.95
VPS52Q8N1B4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS52Q8N1B4 MIR4446-201ENST00000578505 67 ntBASIC2.89□□□□□ -1.95
VPS52Q8N1B4 MIR4795-201ENST00000584182 89 ntBASIC2.89□□□□□ -1.95
VPS52Q8N1B4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS52Q8N1B4 RNU6-91P-201ENST00000607774 107 ntBASIC2.89□□□□□ -1.95
VPS52Q8N1B4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 MIR26A1-201ENST00000362205 77 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.151-201ENST00000363566 112 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 RNU6-1317P-201ENST00000364582 104 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 RNU6-622P-201ENST00000384272 103 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AC004383.1-201ENST00000438135 289 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 DAP3P1-201ENST00000441522 278 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 RPL9P9-202ENST00000466501 579 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AC003982.1-202ENST00000469928 248 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 RN7SL297P-201ENST00000483161 293 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AC008413.1-201ENST00000511864 177 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 RNU1-54P-201ENST00000517181 120 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 CKS1BP7-201ENST00000522230 235 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AC124303.1-201ENST00000605703 360 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 MIR6128-201ENST00000615528 109 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AL359314.1-201ENST00000616913 261 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 AL359757.2-201ENST00000624309 274 ntBASIC2.88□□□□□ -1.95
VPS52Q8N1B4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS52Q8N1B4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 RNU6-858P-201ENST00000362436 107 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 RNU6-601P-201ENST00000384540 107 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 MIR517A-201ENST00000385001 87 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AL512633.1-201ENST00000399931 655 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AL133396.1-201ENST00000432048 687 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AL591043.1-201ENST00000432461 424 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AC243964.1-201ENST00000441814 261 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 OSTCP8-201ENST00000445117 448 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 PCMTD1P1-201ENST00000455560 355 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 RPS29P27-201ENST00000463711 170 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AC026782.1-201ENST00000512952 449 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 SNORA31.18-201ENST00000517043 134 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AC018462.2-201ENST00000605375 395 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AL590808.1-201ENST00000618696 141 ntBASIC2.87□□□□□ -1.95
VPS52Q8N1B4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VPS52Q8N1B4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VPS52Q8N1B4 RNU6-527P-201ENST00000363425 104 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 RNU6-596P-201ENST00000365395 98 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.384-201ENST00000383909 102 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 RNU6-1297P-201ENST00000384415 104 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.535-201ENST00000384612 99 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 RNA5SP390-201ENST00000410191 113 ntBASIC2.86□□□□□ -1.95
VPS52Q8N1B4 AP000275.1-201ENST00000411943 390 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms