| HOOK3 | Q86VS8 | HULC.1-201 | ENST00000612720 | 240 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | DUXAP9-208 | ENST00000622815 | 614 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC139792.3-201 | ENST00000623525 | 224 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AP3S1-209 | ENST00000640413 | 489 nt | TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | MTND5P26-201 | ENST00000426018 | 1752 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | MDM2-206 | ENST00000350057 | 1401 nt | TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | ASPM-202 | ENST00000367408 | 3747 nt | TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | RNU6-827P-201 | ENST00000365553 | 106 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | RNU6-43P-201 | ENST00000384302 | 107 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | SNORA3.2-201 | ENST00000408221 | 125 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | Y_RNA.597-201 | ENST00000410463 | 100 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL030996.1-201 | ENST00000411430 | 235 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL590556.1-201 | ENST00000423231 | 483 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | CBX3P6-201 | ENST00000430257 | 527 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL136369.1-201 | ENST00000437825 | 244 nt | TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL442638.1-201 | ENST00000443359 | 237 nt | TSL 5 BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | FDX1P2-201 | ENST00000450769 | 375 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | SPIN4-AS1-201 | ENST00000451979 | 426 nt | TSL 2 BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC026464.5-201 | ENST00000562497 | 722 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | MIR1273D-201 | ENST00000577266 | 86 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC103987.3-201 | ENST00000582071 | 292 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | LINC00907-210 | ENST00000593316 | 847 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL096840.1-201 | ENST00000603287 | 93 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AL356157.2-201 | ENST00000605122 | 111 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AC004908.3-201 | ENST00000610248 | 625 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | DCAF17-212 | ENST00000611110 | 975 nt | TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | SDR42E1P4-201 | ENST00000620894 | 481 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | AP000560.1-201 | ENST00000624150 | 1937 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| HOOK3 | Q86VS8 | RNU6-1159P-201 | ENST00000362933 | 107 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | TSACC-205 | ENST00000368255 | 751 nt | APPRIS P1 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNU6-259P-201 | ENST00000383999 | 107 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | MIR518A2-201 | ENST00000384966 | 87 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNU2-66P-201 | ENST00000410650 | 161 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC010975.2-201 | ENST00000427781 | 588 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AL139415.2-201 | ENST00000431968 | 163 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | SNAP23P1-201 | ENST00000433229 | 246 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | IFNA20P-201 | ENST00000436840 | 528 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | LINC01198-202 | ENST00000458282 | 558 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC087884.1-201 | ENST00000469738 | 328 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | MAGI1-AS1-201 | ENST00000472514 | 591 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC083798.1-201 | ENST00000472671 | 131 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RN7SL429P-201 | ENST00000479090 | 223 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RN7SL489P-201 | ENST00000486185 | 223 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RN7SL327P-201 | ENST00000488659 | 223 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC074124.1-201 | ENST00000502368 | 375 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AK3P2-201 | ENST00000507976 | 429 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | MTND3P5-201 | ENST00000512798 | 333 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC099554.1-201 | ENST00000520032 | 572 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | DEUP1-203 | ENST00000527307 | 767 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC104383.1-201 | ENST00000530297 | 370 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC103996.1-201 | ENST00000555468 | 102 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC009558.1-201 | ENST00000561174 | 581 nt | TSL 4 BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | MIR3136-201 | ENST00000583498 | 78 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AL034555.1-201 | ENST00000604816 | 211 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNU6-85P-201 | ENST00000605989 | 107 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | Z99129.1-201 | ENST00000612510 | 255 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | MALAT1-207 | ENST00000613376 | 132 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC063943.3-201 | ENST00000615562 | 356 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RN7SL853P-201 | ENST00000617250 | 223 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC069228.1-201 | ENST00000546936 | 1615 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | KNL1-204 | ENST00000527044 | 5404 nt | TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNU6-1322P-201 | ENST00000364309 | 107 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC008440.2-201 | ENST00000413496 | 423 nt | TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC093911.1-201 | ENST00000419129 | 552 nt | TSL 4 BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AL358234.1-201 | ENST00000421132 | 273 nt | TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | OOSP1P1-201 | ENST00000423265 | 274 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | SMG7-AS1-202 | ENST00000432837 | 466 nt | TSL 3 BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AL121601.2-201 | ENST00000438019 | 707 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | LINC01628-201 | ENST00000444266 | 397 nt | TSL 2 BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | PRELID3BP1-201 | ENST00000457142 | 540 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNU6-261P-201 | ENST00000459506 | 102 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RPL21P99-201 | ENST00000480369 | 423 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNU6-965P-201 | ENST00000516721 | 96 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | NTS-203 | ENST00000551529 | 801 nt | TSL 3 BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | ANP32BP3-201 | ENST00000559213 | 706 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | ZNRD1-AS1_3.8-201 | ENST00000611686 | 104 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC073534.2-201 | ENST00000620377 | 381 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | ZEB2_AS1_1.1-201 | ENST00000621504 | 128 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | SNORD98-201 | ENST00000636377 | 67 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | CCDC148-202 | ENST00000409187 | 2523 nt | APPRIS P1 TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | SNORD32A-201 | ENST00000364805 | 84 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | GSTA3-202 | ENST00000370968 | 775 nt | TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNU6-142P-201 | ENST00000384019 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | Y_RNA.481-201 | ENST00000384373 | 102 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | MIR29C-201 | ENST00000385231 | 88 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNA5SP219-201 | ENST00000390940 | 113 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RN7SKP61-201 | ENST00000410642 | 295 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AL109924.3-201 | ENST00000413324 | 393 nt | TSL 2 BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | USP9YP14-201 | ENST00000430663 | 563 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC244670.1-201 | ENST00000436879 | 112 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | LINC02264-201 | ENST00000442020 | 576 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC025428.1-201 | ENST00000444137 | 403 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | MTND2P22-201 | ENST00000444325 | 1033 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC096638.1-201 | ENST00000444678 | 216 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | RNU7-138P-201 | ENST00000459479 | 64 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | SNRPGP7-201 | ENST00000469016 | 106 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC117394.2-201 | ENST00000487827 | 323 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | AC009646.1-201 | ENST00000510455 | 318 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| HOOK3 | Q86VS8 | PARPBP-209 | ENST00000537257 | 976 nt | TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |