Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MIR5696-201ENST00000578474 85 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.57□□□□□ -2
SHFQ7M4L6 AC005014.2-201ENST00000607795 599 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 AC090971.5-201ENST00000621102 293 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.57□□□□□ -2
SHFQ7M4L6 SNORA43.4-201ENST00000629559 138 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.57□□□□□ -2
SHFQ7M4L6 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SHFQ7M4L6 AL109809.4-201ENST00000603520 2185 ntBASIC2.57□□□□□ -2
SHFQ7M4L6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
SHFQ7M4L6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.57□□□□□ -2
SHFQ7M4L6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
SHFQ7M4L6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.56□□□□□ -2
SHFQ7M4L6 RNU6-1010P-201ENST00000362757 107 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 RNU6-1285P-201ENST00000363480 105 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 RNU6-1141P-201ENST00000364520 107 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 SNORA41-201ENST00000384675 132 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 MIR559-201ENST00000385188 96 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 AL512633.1-201ENST00000399931 655 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 RNU2-23P-201ENST00000410545 195 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 AC096664.2-201ENST00000411843 406 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.56□□□□□ -2
SHFQ7M4L6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.56□□□□□ -2
SHFQ7M4L6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.56□□□□□ -2
SHFQ7M4L6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.56□□□□□ -2
SHFQ7M4L6 AC011816.1-201ENST00000441346 546 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 AC009296.1-201ENST00000443146 155 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.56□□□□□ -2
SHFQ7M4L6 AC112771.1-201ENST00000463581 102 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 RN7SL297P-201ENST00000483161 293 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 AC008885.1-201ENST00000514930 301 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 SMURF2P1-201ENST00000514992 481 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 AC005899.2-201ENST00000584353 90 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 AL356157.2-201ENST00000605122 111 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.56□□□□□ -2
SHFQ7M4L6 AL159153.1-201ENST00000619688 317 ntBASIC2.56□□□□□ -2
SHFQ7M4L6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.56□□□□□ -2
SHFQ7M4L6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.56□□□□□ -2
SHFQ7M4L6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.56□□□□□ -2
SHFQ7M4L6 AC096644.4-201ENST00000563417 2912 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AC000403.1-201ENST00000613696 3585 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AC002543.1-201ENST00000299783 1954 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.55□□□□□ -2
SHFQ7M4L6 RNU6-1115P-201ENST00000362490 106 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 RNU6-529P-201ENST00000363383 104 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 Y_RNA.197-201ENST00000364004 102 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 SNORA38.1-201ENST00000364172 131 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.55□□□□□ -2
SHFQ7M4L6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.55□□□□□ -2
SHFQ7M4L6 RN7SKP61-201ENST00000410642 295 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AC138623.1-201ENST00000418060 216 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.55□□□□□ -2
SHFQ7M4L6 Z98742.2-201ENST00000431564 187 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AL353997.1-201ENST00000432936 108 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 MTCYBP6-201ENST00000441810 138 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.55□□□□□ -2
SHFQ7M4L6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.55□□□□□ -2
SHFQ7M4L6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.55□□□□□ -2
SHFQ7M4L6 AC022493.2-201ENST00000506122 481 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 SNORA25.11-201ENST00000515935 105 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 RNU6-470P-201ENST00000515954 104 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 SNORA9.3-201ENST00000516383 129 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 RNU6-307P-201ENST00000516743 106 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 SCARNA11.3-201ENST00000517276 130 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AP002404.1-201ENST00000532005 451 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 MRPS36P4-201ENST00000534436 298 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AC079598.5-201ENST00000547460 117 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 HSPE1P4-201ENST00000550617 308 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.55□□□□□ -2
SHFQ7M4L6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.55□□□□□ -2
SHFQ7M4L6 AC060766.3-201ENST00000591442 263 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AC096772.1-201ENST00000609146 564 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AC084757.4-201ENST00000616350 526 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AC012314.7-201ENST00000619693 93 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 AC099654.7-201ENST00000635788 2127 ntBASIC2.55□□□□□ -2
SHFQ7M4L6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.55□□□□□ -2
SHFQ7M4L6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
SHFQ7M4L6 ZNF299P-201ENST00000406845 1804 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 MTND5P30-201ENST00000452896 1731 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 AL359854.1-201ENST00000614203 1594 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.54□□□□□ -2
SHFQ7M4L6 SNORD114-19-201ENST00000363072 75 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 Y_RNA.395-201ENST00000383945 109 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 RNU6-474P-201ENST00000384243 107 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 Y_RNA.504-201ENST00000384481 104 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 RNU6-1011P-201ENST00000384668 107 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 MIR1289-1-201ENST00000408836 144 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.54□□□□□ -2
SHFQ7M4L6 AC022018.1-201ENST00000430685 241 ntBASIC2.54□□□□□ -2
SHFQ7M4L6 RPL23AP50-201ENST00000434149 455 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms