Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RN7SKP298-201ENST00000515950 94 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 IGKV3-31-201ENST00000523109 329 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 COPS8P3-201ENST00000526024 482 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 HIF1AP1-201ENST00000553642 175 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AL096840.1-201ENST00000603287 93 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AL022345.1-201ENST00000607292 135 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC013412.1-201ENST00000610687 192 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AC005296.1-201ENST00000616145 209 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
NIPAL3Q6P499 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NIPAL3Q6P499 AP000560.1-201ENST00000624150 1937 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 RNU4-15P-201ENST00000362613 141 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 RNU6-1164P-201ENST00000364428 107 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 RNU6-996P-201ENST00000365438 107 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 RNU6-827P-201ENST00000365553 106 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 RNU6-142P-201ENST00000384019 107 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 SNORA75-201ENST00000384158 137 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 RPS29P13-201ENST00000402041 169 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AL356432.1-201ENST00000405809 419 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AL590135.1-201ENST00000422215 156 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 MTCYBP8-201ENST00000422855 651 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC019205.3-201ENST00000424573 156 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AL451074.3-201ENST00000437709 472 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC016700.2-201ENST00000446011 156 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC015911.1-201ENST00000495111 156 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 RPS29P21-201ENST00000496272 170 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC010486.3-201ENST00000511602 785 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 HSPE1P4-201ENST00000550617 308 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC103996.1-201ENST00000555468 102 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AL158211.1-201ENST00000566763 763 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 AC004223.2-201ENST00000590309 544 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 CYP2C61P-201ENST00000604072 290 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.79□□□□□ -2.12
NIPAL3Q6P499 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.79□□□□□ -2.12
NIPAL3Q6P499 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 RNU1-58P-201ENST00000362413 163 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 Y_RNA.296-201ENST00000364930 108 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 MIR597-201ENST00000384968 97 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 SUMO2P12-201ENST00000405924 140 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AL357139.1-201ENST00000407792 426 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 MTATP6P17-201ENST00000431030 672 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AL445646.1-201ENST00000431784 216 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AC002486.1-201ENST00000435098 391 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AC098826.2-201ENST00000452011 651 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 RPS3AP17-201ENST00000472594 777 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AC132942.1-201ENST00000486753 483 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 MIR5583-1-201ENST00000580941 59 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AC119751.7-201ENST00000600494 245 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AL356157.2-201ENST00000605122 111 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 AC098657.3-201ENST00000620434 263 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 U1.36-201ENST00000620684 176 ntBASIC1.78□□□□□ -2.12
NIPAL3Q6P499 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
NIPAL3Q6P499 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
NIPAL3Q6P499 KPNA2P1-201ENST00000458289 1591 ntBASIC1.77□□□□□ -2.13
NIPAL3Q6P499 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.77□□□□□ -2.13
NIPAL3Q6P499 SNORA8-201ENST00000384574 139 ntBASIC1.77□□□□□ -2.13
NIPAL3Q6P499 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
NIPAL3Q6P499 SNORA12-201ENST00000391162 147 ntBASIC1.77□□□□□ -2.13
NIPAL3Q6P499 RNA5SP212-201ENST00000391223 107 ntBASIC1.77□□□□□ -2.13
NIPAL3Q6P499 AC068050.1-201ENST00000394891 380 ntBASIC1.77□□□□□ -2.13
NIPAL3Q6P499 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.77□□□□□ -2.13
NIPAL3Q6P499 AC078809.1-201ENST00000427601 140 ntBASIC1.77□□□□□ -2.13
NIPAL3Q6P499 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.77□□□□□ -2.13
NIPAL3Q6P499 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.77□□□□□ -2.13
NIPAL3Q6P499 RNA5SP57-201ENST00000459463 123 ntBASIC1.77□□□□□ -2.13
NIPAL3Q6P499 RPL38P4-201ENST00000502376 214 ntBASIC1.77□□□□□ -2.13
NIPAL3Q6P499 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.77□□□□□ -2.13
NIPAL3Q6P499 MIR449C-201ENST00000516047 92 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms