Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 Y_RNA.322-201ENST00000365151 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 MIR30B-201ENST00000384850 88 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 MIR199A2-201ENST00000385289 110 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL133475.1-201ENST00000404414 305 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC023141.4-201ENST00000412031 328 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL139247.1-201ENST00000422768 325 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL161651.1-201ENST00000440882 223 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC007395.1-201ENST00000451333 677 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.650-201ENST00000459002 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU1-61P-201ENST00000516107 151 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.703-201ENST00000516846 111 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.777-201ENST00000516982 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.771-201ENST00000598668 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC022441.3-201ENST00000605737 136 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC005828.6-201ENST00000606610 232 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL590240.4-201ENST00000616908 390 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.789-201ENST00000622480 102 ntBASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQA1Q5Y7H0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNA5SP197-201ENST00000363357 119 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.179-201ENST00000363844 90 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-923P-201ENST00000364753 107 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 MTCO2P33-201ENST00000402100 465 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL591034.1-201ENST00000407447 340 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 SNORA57.3-201ENST00000411095 141 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 RPS26P42-201ENST00000413485 326 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL500522.2-201ENST00000448562 343 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC146944.2-203ENST00000502493 354 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC139495.1-202ENST00000513164 354 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC026402.1-201ENST00000513642 170 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC233702.2-202ENST00000562547 291 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 RN7SL703P-201ENST00000578485 302 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC072026.1-201ENST00000605023 201 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC021753.1-201ENST00000635724 168 ntBASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQA1Q5Y7H0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.101-201ENST00000363154 102 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-799P-201ENST00000363567 107 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 SNORA72.2-201ENST00000365028 127 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-487P-201ENST00000365430 104 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 EI24P2-201ENST00000397776 1076 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 RN7SKP156-201ENST00000410308 342 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 UQCRBP2-201ENST00000447827 297 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-625P-201ENST00000459412 107 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-1278P-201ENST00000516130 107 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC018448.1-201ENST00000552843 316 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 SNORD98-201ENST00000636377 67 ntBASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DQA1Q5Y7H0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC004944.1-201ENST00000517807 3059 ntBASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 AC073073.2-201ENST00000609827 2578 ntBASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 Y_RNA.498-201ENST00000384460 102 ntBASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 SNORA46.1-201ENST00000391069 153 ntBASIC3.53□□□□□ -1.84
HLA-DQA1Q5Y7H0 RNU6-918P-201ENST00000391219 106 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms