Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
RNF20Q5VTR2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF20Q5VTR2 AC126755.2-208ENST00000327792 462 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 AC138969.1-213ENST00000331436 462 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 RNU5F-3P-201ENST00000363767 117 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 RNU4-84P-201ENST00000364200 139 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 RNU6-793P-201ENST00000384233 104 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 AL356095.1-201ENST00000417217 199 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 AC019205.3-201ENST00000424573 156 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF20Q5VTR2 AC091179.3-201ENST00000474761 144 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 RPS27AP10-201ENST00000496103 208 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF20Q5VTR2 SNORA31.16-201ENST00000516773 139 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 CYCSP23-201ENST00000519781 313 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 AC112484.5-201ENST00000624189 228 ntBASIC4.71□□□□□ -1.66
RNF20Q5VTR2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RNF20Q5VTR2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RNF20Q5VTR2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF20Q5VTR2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 AC099654.7-201ENST00000635788 2127 ntBASIC4.7□□□□□ -1.66
RNF20Q5VTR2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 CUL1P1-201ENST00000509510 2425 ntBASIC4.7□□□□□ -1.66
RNF20Q5VTR2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 Y_RNA.23-201ENST00000362496 106 ntBASIC4.7□□□□□ -1.66
RNF20Q5VTR2 RNU4-17P-201ENST00000365598 141 ntBASIC4.7□□□□□ -1.66
RNF20Q5VTR2 MIR607-201ENST00000385241 96 ntBASIC4.7□□□□□ -1.66
RNF20Q5VTR2 PPIAP31-201ENST00000405422 495 ntBASIC4.7□□□□□ -1.66
RNF20Q5VTR2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 RNA5SP179-201ENST00000517284 121 ntBASIC4.7□□□□□ -1.66
RNF20Q5VTR2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 AC091167.4-201ENST00000605079 184 ntBASIC4.7□□□□□ -1.66
RNF20Q5VTR2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF20Q5VTR2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 RNU6-50P-201ENST00000362356 103 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 MIR888-201ENST00000401186 77 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 RNU6-257P-201ENST00000410238 98 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 RN7SKP53-201ENST00000411337 315 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 AC009220.1-201ENST00000451614 275 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 AP002001.1-203ENST00000534002 267 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 AC110741.2-201ENST00000605278 268 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 MIR6867-201ENST00000610636 67 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 Y_RNA.778-201ENST00000620203 90 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 MIR6758-201ENST00000620653 63 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 MIR3529-201ENST00000637713 78 ntBASIC4.69□□□□□ -1.66
RNF20Q5VTR2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF20Q5VTR2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF20Q5VTR2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF20Q5VTR2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF20Q5VTR2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF20Q5VTR2 Y_RNA.75-201ENST00000362927 97 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 Y_RNA.329-201ENST00000365209 107 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 SNORA62-201ENST00000365493 153 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF20Q5VTR2 MIR141-201ENST00000384975 95 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 RNA5SP129-201ENST00000410276 118 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 RNU2-54P-201ENST00000410299 190 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 RPS26P42-201ENST00000413485 326 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 RPS20P10-201ENST00000451209 253 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 Y_RNA.637-201ENST00000459424 114 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 AC090525.1-201ENST00000479116 478 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF20Q5VTR2 CKS1BP7-201ENST00000522230 235 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 YPEL5P3-201ENST00000547227 352 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.68□□□□□ -1.66
RNF20Q5VTR2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
RNF20Q5VTR2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF20Q5VTR2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
RNF20Q5VTR2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF20Q5VTR2 RNU6-799P-201ENST00000363567 107 ntBASIC4.67□□□□□ -1.66
RNF20Q5VTR2 RNU6-1310P-201ENST00000384153 107 ntBASIC4.67□□□□□ -1.66
RNF20Q5VTR2 RPL21P65-201ENST00000406094 466 ntBASIC4.67□□□□□ -1.66
RNF20Q5VTR2 RNA5SP475-201ENST00000410568 110 ntBASIC4.67□□□□□ -1.66
RNF20Q5VTR2 NDUFS5P4-201ENST00000412983 318 ntBASIC4.67□□□□□ -1.66
RNF20Q5VTR2 AC009963.1-201ENST00000417265 157 ntBASIC4.67□□□□□ -1.66
RNF20Q5VTR2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF20Q5VTR2 AL500522.2-201ENST00000448562 343 ntBASIC4.67□□□□□ -1.66
RNF20Q5VTR2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.67□□□□□ -1.66
RNF20Q5VTR2 MIR3684-201ENST00000579779 74 ntBASIC4.67□□□□□ -1.66
RNF20Q5VTR2 MIR3674-201ENST00000636576 68 ntBASIC4.67□□□□□ -1.66
RNF20Q5VTR2 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms