Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNU1-140P-201ENST00000365040 165 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 AL590004.1-201ENST00000405321 300 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 MIR548P-201ENST00000408336 84 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 RNU6-325P-201ENST00000411132 105 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 AC138623.1-201ENST00000418060 216 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 RPS29P6-201ENST00000438196 145 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 RNA5SP112-201ENST00000515937 99 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 AC022432.1-201ENST00000595739 310 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 CYP2C61P-201ENST00000604072 290 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 SCARNA4-202ENST00000625402 129 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LONRF3Q496Y0 AL109809.4-201ENST00000603520 2185 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.197-201ENST00000364004 102 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 RNU6-1106P-201ENST00000390845 107 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 AL117339.3-201ENST00000418733 162 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 AC244505.4-201ENST00000434905 287 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.35□□□□□ -1.87
LONRF3Q496Y0 SSXP5-201ENST00000443473 287 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.35□□□□□ -1.87
LONRF3Q496Y0 FTH1P25-201ENST00000447665 469 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 AC006026.2-201ENST00000457376 180 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 RNU6-1037P-201ENST00000459571 107 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 AC117440.1-201ENST00000474107 571 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 MED28P2-201ENST00000475771 317 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.35□□□□□ -1.87
LONRF3Q496Y0 AC009163.5-201ENST00000575421 637 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.35□□□□□ -1.87
LONRF3Q496Y0 MIR3171-201ENST00000584270 74 ntBASIC3.35□□□□□ -1.87
LONRF3Q496Y0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LONRF3Q496Y0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LONRF3Q496Y0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.35□□□□□ -1.87
LONRF3Q496Y0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LONRF3Q496Y0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.34□□□□□ -1.87
LONRF3Q496Y0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.34□□□□□ -1.87
LONRF3Q496Y0 SNORA38-201ENST00000363946 132 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.395-201ENST00000383945 109 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 RNU6-890P-201ENST00000384121 107 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 RNU6-790P-201ENST00000384479 105 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 MIR559-201ENST00000385188 96 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 MIR181B1-201ENST00000385240 110 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 Z82205.1-201ENST00000428456 297 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.34□□□□□ -1.87
LONRF3Q496Y0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LONRF3Q496Y0 RNU7-26P-201ENST00000458980 63 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.631-201ENST00000459607 101 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 AC112771.1-201ENST00000463581 102 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 RPS29P26-201ENST00000477483 171 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.34□□□□□ -1.87
LONRF3Q496Y0 AC109479.2-201ENST00000517842 174 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 AC103996.1-201ENST00000555468 102 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 AC023824.2-201ENST00000566185 400 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.34□□□□□ -1.87
LONRF3Q496Y0 SNRPGP17-201ENST00000603780 214 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 AC092608.2-201ENST00000624427 218 ntBASIC3.34□□□□□ -1.87
LONRF3Q496Y0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.34□□□□□ -1.87
LONRF3Q496Y0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.34□□□□□ -1.87
LONRF3Q496Y0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.34□□□□□ -1.88
LONRF3Q496Y0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LONRF3Q496Y0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LONRF3Q496Y0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.33□□□□□ -1.88
LONRF3Q496Y0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
LONRF3Q496Y0 Y_RNA.2-201ENST00000362330 96 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 SNORA5B-201ENST00000363786 132 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 Y_RNA.445-201ENST00000384168 102 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 RNU6-842P-201ENST00000384269 107 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.33□□□□□ -1.88
LONRF3Q496Y0 HMGN2P35-201ENST00000412164 270 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.33□□□□□ -1.88
LONRF3Q496Y0 BX276092.3-201ENST00000424182 230 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.33□□□□□ -1.88
LONRF3Q496Y0 AL133396.1-201ENST00000432048 687 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 RPS15AP10-201ENST00000432472 382 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.33□□□□□ -1.88
LONRF3Q496Y0 MIR2053-201ENST00000459295 91 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.33□□□□□ -1.88
LONRF3Q496Y0 PTP4A1P4-201ENST00000512479 322 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.33□□□□□ -1.88
LONRF3Q496Y0 ELOCP31-201ENST00000540463 467 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 CPDP1-201ENST00000579660 283 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 AC024153.1-201ENST00000603103 365 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 AC009314.1-201ENST00000603871 304 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 MIR7106-201ENST00000612419 65 ntBASIC3.33□□□□□ -1.88
LONRF3Q496Y0 Z75746.1-201ENST00000440243 2080 ntBASIC3.32□□□□□ -1.88
LONRF3Q496Y0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LONRF3Q496Y0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LONRF3Q496Y0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms