Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 Y_RNA.101-201ENST00000363154 102 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 SNORD116-18-201ENST00000383961 92 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 Y_RNA.441-201ENST00000384123 112 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RTN1Q16799 AL512633.1-201ENST00000399931 655 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 RAB28P5-201ENST00000427490 651 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 HMGN2P10-201ENST00000448085 265 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 AL121594.1-201ENST00000475906 575 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.4□□□□□ -1.71
RTN1Q16799 AC023141.12-201ENST00000512399 199 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 RNU6-155P-201ENST00000516347 100 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.4□□□□□ -1.71
RTN1Q16799 MTND1P7-201ENST00000632801 297 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
RTN1Q16799 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.4□□□□□ -1.71
RTN1Q16799 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.4□□□□□ -1.71
RTN1Q16799 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RTN1Q16799 MAPK10-373ENST00000641983 6772 ntBASIC4.4□□□□□ -1.71
RTN1Q16799 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RTN1Q16799 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN1Q16799 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN1Q16799 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN1Q16799 AC099654.7-201ENST00000635788 2127 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RTN1Q16799 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN1Q16799 RNU6-793P-201ENST00000384233 104 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 SNORA40.19-201ENST00000390846 128 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 RNA5SP390-201ENST00000410191 113 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 RN7SKP156-201ENST00000410308 342 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 AL591419.1-201ENST00000427423 339 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN1Q16799 AC084357.1-201ENST00000473404 255 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RTN1Q16799 HMGB3P3-201ENST00000510526 400 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 SNORA31.16-201ENST00000516773 139 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.39□□□□□ -1.71
RTN1Q16799 AC090897.2-201ENST00000581715 130 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 MIR486-1-201ENST00000612171 68 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 AC004467.1-201ENST00000615678 330 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 AC084757.4-201ENST00000616350 526 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 AC091932.3-201ENST00000624223 323 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.39□□□□□ -1.71
RTN1Q16799 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN1Q16799 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RTN1Q16799 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN1Q16799 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RTN1Q16799 AC073073.2-201ENST00000609827 2578 ntBASIC4.39□□□□□ -1.71
RTN1Q16799 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RTN1Q16799 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
RTN1Q16799 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTN1Q16799 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTN1Q16799 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.38□□□□□ -1.71
RTN1Q16799 RNU6-653P-201ENST00000363074 106 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 RNA5SP167-201ENST00000365461 116 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 MIR549A-201ENST00000385268 96 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 RPL23AP48-201ENST00000406913 488 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 RNU5E-9P-201ENST00000411164 104 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 BMS1P22-201ENST00000414726 313 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 AL139247.1-201ENST00000422768 325 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.38□□□□□ -1.71
RTN1Q16799 AP000873.1-201ENST00000463987 400 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.38□□□□□ -1.71
RTN1Q16799 AC146944.2-203ENST00000502493 354 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 AC139495.1-202ENST00000513164 354 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 ACA59.2-201ENST00000517061 156 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 RN7SKP289-201ENST00000517244 295 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 AC011602.1-201ENST00000546484 331 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.38□□□□□ -1.71
RTN1Q16799 AC021739.1-201ENST00000559631 174 ntBASIC4.38□□□□□ -1.71
RTN1Q16799 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.38□□□□□ -1.71
RTN1Q16799 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTN1Q16799 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RTN1Q16799 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.38□□□□□ -1.71
RTN1Q16799 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.38□□□□□ -1.71
RTN1Q16799 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTN1Q16799 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.38□□□□□ -1.71
RTN1Q16799 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RTN1Q16799 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTN1Q16799 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RTN1Q16799 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTN1Q16799 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTN1Q16799 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTN1Q16799 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTN1Q16799 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTN1Q16799 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.37□□□□□ -1.71
RTN1Q16799 Y_RNA.272-201ENST00000364696 102 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 RNU6-1117P-201ENST00000384525 104 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 Y_RNA.571-201ENST00000384753 98 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RTN1Q16799 RPL21P17-201ENST00000397467 475 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 CRYBB2P1-203ENST00000415709 538 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 AC099548.1-201ENST00000421443 426 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 BTF3P11-201ENST00000426582 477 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.37□□□□□ -1.71
RTN1Q16799 RPS15AP5-201ENST00000436276 388 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.37□□□□□ -1.71
RTN1Q16799 AC091179.3-201ENST00000474761 144 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 AC090525.1-201ENST00000479116 478 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 AC026402.1-201ENST00000513642 170 ntBASIC4.37□□□□□ -1.71
RTN1Q16799 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms