Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC131235.4-201ENST00000609288 620 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 RNU6-1192P-201ENST00000612197 107 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 RNU6-489P-201ENST00000618289 107 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 AC009033.1-201ENST00000624279 431 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 AC091948.2-201ENST00000636510 279 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 ZNF663P-202ENST00000641770 1131 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CACNA1EQ15878 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CACNA1EQ15878 SNORA9.1-201ENST00000362412 131 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 RNU6-778P-201ENST00000363269 103 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 RNU6-1284P-201ENST00000363701 100 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 RNU6-609P-201ENST00000365459 107 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
CACNA1EQ15878 MTND4P3-201ENST00000417829 541 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 BTF3L4P3-201ENST00000418879 476 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.35□□□□□ -2.35
CACNA1EQ15878 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.35□□□□□ -2.35
CACNA1EQ15878 MTND1P30-201ENST00000441241 901 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 USP9YP17-201ENST00000444617 696 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 AL358794.1-201ENST00000445689 381 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 PGBD4P5-201ENST00000445958 426 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1EQ15878 FCF1P6-201ENST00000456841 595 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1EQ15878 AC011406.1-201ENST00000512440 370 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 AC116347.2-201ENST00000514912 523 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 RNU6-390P-201ENST00000516259 103 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 AC012213.3-201ENST00000577199 777 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 MIR1273C-201ENST00000578669 77 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1EQ15878 AL355598.1-201ENST00000604169 202 ntBASIC0.35□□□□□ -2.35
CACNA1EQ15878 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.35
CACNA1EQ15878 SNORD95.1-201ENST00000364099 68 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 RNU6-1019P-201ENST00000364424 107 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 SNORA4.3-201ENST00000365564 137 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 RNU6-395P-201ENST00000365662 106 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 RNU6-166P-201ENST00000384371 107 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 RNA5SP501-201ENST00000410990 112 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AL669831.1-202ENST00000428504 417 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 PAXBP1P1-201ENST00000449315 447 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 HSPE1P13-201ENST00000451143 297 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 BTF3P15-201ENST00000455606 336 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 snoU109.2-201ENST00000459316 135 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 RPS26P55-201ENST00000471178 356 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AC011005.2-201ENST00000487324 359 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 RNU6-150P-201ENST00000516237 95 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 RNU6-703P-201ENST00000516946 107 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 RNU6-1261P-201ENST00000517194 104 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AP001189.2-201ENST00000527320 189 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AP003327.1-201ENST00000529684 127 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 DEFB130C-202ENST00000530001 230 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 MIR3167-201ENST00000579623 85 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 VN1R83P-201ENST00000595685 445 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AL021879.1-201ENST00000611756 288 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AL357080.1-201ENST00000617394 239 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
CACNA1EQ15878 U1.36-201ENST00000620684 176 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AC120349.3-201ENST00000624377 529 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 PCMTD1P7-201ENST00000634506 357 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 AC132825.7-201ENST00000638744 335 ntBASIC0.34□□□□□ -2.36
CACNA1EQ15878 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CACNA1EQ15878 AC092268.1-201ENST00000342691 405 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 snoU2-30.2-201ENST00000362805 70 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU5B-4P-201ENST00000363508 111 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU5E-6P-201ENST00000365574 115 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU6-723P-201ENST00000383973 107 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU6-1200P-201ENST00000384162 107 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU6-160P-201ENST00000384591 107 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AL357139.1-201ENST00000407792 426 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RNU6-1054P-201ENST00000411293 104 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 VPS26BP1-201ENST00000417155 755 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 AL606490.4-201ENST00000423117 127 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 CALM2P2-201ENST00000428512 440 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 ART2BP-201ENST00000453501 499 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RPL31P3-201ENST00000458430 332 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 snoU13.8-201ENST00000458890 104 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 RPL30P7-201ENST00000479312 323 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC091435.1-201ENST00000505442 584 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC010486.2-201ENST00000505572 483 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC087894.1-201ENST00000538359 518 ntBASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.33□□□□□ -2.36
CACNA1EQ15878 AC021231.3-201ENST00000558497 370 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms