Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RNU7-143P-201ENST00000516781 65 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 AP003730.1-201ENST00000524605 285 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDH1Q08174 HMGN2P15-201ENST00000585707 270 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.98□□□□□ -1.77
PCDH1Q08174 AL008718.3-201ENST00000610217 321 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 MIR3674-201ENST00000636576 68 ntBASIC3.98□□□□□ -1.77
PCDH1Q08174 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDH1Q08174 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDH1Q08174 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDH1Q08174 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PCDH1Q08174 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH1Q08174 AL672296.1-201ENST00000427780 2158 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PCDH1Q08174 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH1Q08174 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH1Q08174 AC004944.1-201ENST00000517807 3059 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH1Q08174 RNU6-727P-201ENST00000363592 107 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 Y_RNA.272-201ENST00000364696 102 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDH1Q08174 Y_RNA.580-201ENST00000391004 95 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 MIR320B2-201ENST00000408479 138 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDH1Q08174 BTF3P11-201ENST00000426582 477 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH1Q08174 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH1Q08174 UQCRHP4-201ENST00000471686 272 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AC140059.1-201ENST00000489238 361 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AIG1P1-201ENST00000503376 148 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.97□□□□□ -1.77
PCDH1Q08174 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDH1Q08174 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.97□□□□□ -1.77
PCDH1Q08174 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDH1Q08174 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AC022655.2-201ENST00000577280 318 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 MIR3609-201ENST00000582661 80 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AL133393.1-201ENST00000603277 287 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AL162713.1-201ENST00000604480 262 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AC110741.2-201ENST00000605278 268 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AC005520.5-201ENST00000613926 164 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 AC084757.4-201ENST00000616350 526 ntBASIC3.97□□□□□ -1.77
PCDH1Q08174 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH1Q08174 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH1Q08174 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH1Q08174 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH1Q08174 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDH1Q08174 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDH1Q08174 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDH1Q08174 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
PCDH1Q08174 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PCDH1Q08174 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PCDH1Q08174 SNORD116-18-201ENST00000383961 92 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 SNORA18.3-201ENST00000384122 132 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PCDH1Q08174 SNORA3C-201ENST00000408792 125 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 CYCSP48-201ENST00000417124 323 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 AC009963.1-201ENST00000417265 157 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 RNU2-58P-201ENST00000516403 183 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 AP002001.1-203ENST00000534002 267 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 MIR3138-201ENST00000585238 82 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH1Q08174 SNRPGP20-201ENST00000604477 205 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.96□□□□□ -1.78
PCDH1Q08174 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDH1Q08174 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH1Q08174 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH1Q08174 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDH1Q08174 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDH1Q08174 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH1Q08174 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH1Q08174 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH1Q08174 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH1Q08174 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH1Q08174 SNORA60-201ENST00000362396 134 ntBASIC3.95□□□□□ -1.78
PCDH1Q08174 RNU6-1130P-201ENST00000365434 107 ntBASIC3.95□□□□□ -1.78
PCDH1Q08174 RNA5SP475-201ENST00000410568 110 ntBASIC3.95□□□□□ -1.78
PCDH1Q08174 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH1Q08174 SNRPGP5-201ENST00000456003 220 ntBASIC3.95□□□□□ -1.78
PCDH1Q08174 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH1Q08174 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH1Q08174 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH1Q08174 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDH1Q08174 TVP23BP1-201ENST00000557500 617 ntBASIC3.95□□□□□ -1.78
PCDH1Q08174 AC105137.2-201ENST00000569073 466 ntBASIC3.95□□□□□ -1.78
PCDH1Q08174 MIR3923-201ENST00000579521 83 ntBASIC3.95□□□□□ -1.78
PCDH1Q08174 AL445567.2-201ENST00000618935 498 ntBASIC3.95□□□□□ -1.78
PCDH1Q08174 MIR6830-201ENST00000636015 70 ntBASIC3.95□□□□□ -1.78
PCDH1Q08174 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH1Q08174 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH1Q08174 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDH1Q08174 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDH1Q08174 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDH1Q08174 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH1Q08174 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH1Q08174 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDH1Q08174 MIR383-201ENST00000362257 73 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 Y_RNA.7-201ENST00000362352 102 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 SNORA1.3-201ENST00000384676 136 ntBASIC3.94□□□□□ -1.78
PCDH1Q08174 CBX3P9-201ENST00000402326 552 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms