Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL391646.1-201ENST00000603860 190 ntBASIC0.68□□□□□ -2.3
CCL20P78556 AC040896.1-201ENST00000613819 479 ntBASIC0.68□□□□□ -2.3
CCL20P78556 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.68□□□□□ -2.3
CCL20P78556 AL157786.1-207ENST00000627771 695 ntBASIC0.68□□□□□ -2.3
CCL20P78556 AC013437.2-201ENST00000639587 677 ntBASIC0.68□□□□□ -2.3
CCL20P78556 AL391516.1-201ENST00000554380 2449 ntBASIC0.67□□□□□ -2.3
CCL20P78556 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.67□□□□□ -2.3
CCL20P78556 MIR222-201ENST00000384992 110 ntBASIC0.67□□□□□ -2.3
CCL20P78556 RNU6-1000P-201ENST00000391066 106 ntBASIC0.67□□□□□ -2.3
CCL20P78556 AL356776.1-201ENST00000406574 447 ntBASIC0.67□□□□□ -2.3
CCL20P78556 RN7SKP61-201ENST00000410642 295 ntBASIC0.67□□□□□ -2.3
CCL20P78556 AC004965.1-201ENST00000413033 213 ntBASIC0.67□□□□□ -2.3
CCL20P78556 BTF3P4-201ENST00000418852 495 ntBASIC0.67□□□□□ -2.3
CCL20P78556 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.67□□□□□ -2.3
CCL20P78556 AC009474.2-201ENST00000451383 136 ntBASIC0.67□□□□□ -2.3
CCL20P78556 RPL31P3-201ENST00000458430 332 ntBASIC0.67□□□□□ -2.3
CCL20P78556 AL049829.1-201ENST00000465411 156 ntBASIC0.67□□□□□ -2.3
CCL20P78556 RPS26P45-201ENST00000471748 340 ntBASIC0.67□□□□□ -2.3
CCL20P78556 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
CCL20P78556 RNA5SP337-201ENST00000517007 109 ntBASIC0.67□□□□□ -2.3
CCL20P78556 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.67□□□□□ -2.3
CCL20P78556 AP005136.1-201ENST00000579765 429 ntBASIC0.67□□□□□ -2.3
CCL20P78556 MIR5692A1-201ENST00000580523 69 ntBASIC0.67□□□□□ -2.3
CCL20P78556 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.67□□□□□ -2.3
CCL20P78556 MIR6798-201ENST00000612887 67 ntBASIC0.67□□□□□ -2.3
CCL20P78556 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.67□□□□□ -2.3
CCL20P78556 AC068647.2-201ENST00000637380 353 ntBASIC0.67□□□□□ -2.3
CCL20P78556 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.67□□□□□ -2.3
CCL20P78556 RNU6-105P-201ENST00000363909 104 ntBASIC0.66□□□□□ -2.3
CCL20P78556 RNU6-371P-201ENST00000364283 108 ntBASIC0.66□□□□□ -2.3
CCL20P78556 MTCYBP2-201ENST00000407745 171 ntBASIC0.66□□□□□ -2.3
CCL20P78556 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
CCL20P78556 RNU6-757P-201ENST00000410334 100 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.66□□□□□ -2.3
CCL20P78556 COX6CP10-201ENST00000416832 224 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AL590135.1-201ENST00000422215 156 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AC019205.3-201ENST00000424573 156 ntBASIC0.66□□□□□ -2.3
CCL20P78556 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.66□□□□□ -2.3
CCL20P78556 RPS6P15-201ENST00000431996 751 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AC069257.2-201ENST00000441819 155 ntBASIC0.66□□□□□ -2.3
CCL20P78556 PRPS1P1-201ENST00000445305 876 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AC016700.2-201ENST00000446011 156 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.66□□□□□ -2.3
CCL20P78556 AC015911.1-201ENST00000495111 156 ntBASIC0.66□□□□□ -2.3
CCL20P78556 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.66□□□□□ -2.3
CCL20P78556 AC116347.2-201ENST00000514912 523 ntBASIC0.66□□□□□ -2.3
CCL20P78556 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.66□□□□□ -2.3
CCL20P78556 AC027807.1-201ENST00000559921 996 ntBASIC0.66□□□□□ -2.3
CCL20P78556 MIR5697-201ENST00000578045 78 ntBASIC0.66□□□□□ -2.3
CCL20P78556 MIR3664-201ENST00000579074 99 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AC107304.1-201ENST00000604229 296 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AC013244.3-201ENST00000605614 388 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AL020996.3-201ENST00000606617 222 ntBASIC0.66□□□□□ -2.3
CCL20P78556 AL021879.1-201ENST00000611756 288 ntBASIC0.66□□□□□ -2.3
CCL20P78556 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CCL20P78556 AP000484.1-201ENST00000620067 1252 ntBASIC0.66□□□□□ -2.3
CCL20P78556 U4.7-201ENST00000638126 106 ntBASIC0.66□□□□□ -2.3
CCL20P78556 RNU5E-10P-201ENST00000363506 118 ntBASIC0.65□□□□□ -2.31
CCL20P78556 RNU6-457P-201ENST00000363999 107 ntBASIC0.65□□□□□ -2.31
CCL20P78556 SNORA24.1-201ENST00000384401 135 ntBASIC0.65□□□□□ -2.31
CCL20P78556 RNU6-809P-201ENST00000384461 107 ntBASIC0.65□□□□□ -2.31
CCL20P78556 MIR515-2-201ENST00000384883 83 ntBASIC0.65□□□□□ -2.31
CCL20P78556 MIR515-1-201ENST00000384884 83 ntBASIC0.65□□□□□ -2.31
CCL20P78556 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
CCL20P78556 MTCO1P21-201ENST00000416634 589 ntBASIC0.65□□□□□ -2.31
CCL20P78556 POLR2J4-204ENST00000418424 324 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.65□□□□□ -2.31
CCL20P78556 CALM2P2-201ENST00000428512 440 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AC243964.1-201ENST00000441814 261 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AC073910.1-201ENST00000445047 438 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.65□□□□□ -2.31
CCL20P78556 RNU7-14P-201ENST00000459331 62 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AC010531.2-201ENST00000465012 153 ntBASIC0.65□□□□□ -2.31
CCL20P78556 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.65□□□□□ -2.31
CCL20P78556 RBBP4P6-201ENST00000508098 202 ntBASIC0.65□□□□□ -2.31
CCL20P78556 MTND3P25-201ENST00000509243 135 ntBASIC0.65□□□□□ -2.31
CCL20P78556 RNU6-1041P-201ENST00000516254 102 ntBASIC0.65□□□□□ -2.31
CCL20P78556 SNORA31.16-201ENST00000516773 139 ntBASIC0.65□□□□□ -2.31
CCL20P78556 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.65□□□□□ -2.31
CCL20P78556 ZNF321P-202ENST00000550843 495 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AC021231.3-201ENST00000558497 370 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.65□□□□□ -2.31
CCL20P78556 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.65□□□□□ -2.31
CCL20P78556 MIR4661-201ENST00000582720 75 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AC008752.3-201ENST00000588113 712 ntBASIC0.65□□□□□ -2.31
CCL20P78556 HMGN1P30-201ENST00000589286 268 ntBASIC0.65□□□□□ -2.31
CCL20P78556 BNIP3P40-201ENST00000596017 556 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AC025811.1-201ENST00000604312 472 ntBASIC0.65□□□□□ -2.31
CCL20P78556 FAM71BP1-201ENST00000604431 523 ntBASIC0.65□□□□□ -2.31
CCL20P78556 AC097478.2-201ENST00000610572 514 ntBASIC0.65□□□□□ -2.31
CCL20P78556 MIR6852-201ENST00000621699 66 ntBASIC0.65□□□□□ -2.31
CCL20P78556 RNU4-68P-201ENST00000364314 141 ntBASIC0.64□□□□□ -2.31
CCL20P78556 RNU4-56P-201ENST00000364700 142 ntBASIC0.64□□□□□ -2.31
CCL20P78556 SNORD31B-201ENST00000364977 69 ntBASIC0.64□□□□□ -2.31
CCL20P78556 RNA5SP259-201ENST00000365541 109 ntBASIC0.64□□□□□ -2.31
CCL20P78556 U8.10-201ENST00000384260 133 ntBASIC0.64□□□□□ -2.31
CCL20P78556 RNU6-43P-201ENST00000384302 107 ntBASIC0.64□□□□□ -2.31
CCL20P78556 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.64□□□□□ -2.31
CCL20P78556 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.64□□□□□ -2.31
CCL20P78556 AC244670.1-201ENST00000436879 112 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms