Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-1.13□□□□□ -2.59
RPL39P62891 RAC1P7-201ENST00000445367 377 ntBASIC-1.13□□□□□ -2.59
RPL39P62891 MTND1P3-201ENST00000484956 952 ntBASIC-1.13□□□□□ -2.59
RPL39P62891 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-1.13□□□□□ -2.59
RPL39P62891 SNORA70.12-201ENST00000516084 153 ntBASIC-1.13□□□□□ -2.59
RPL39P62891 IL7-206ENST00000520269 456 ntTSL 3 BASIC-1.13□□□□□ -2.59
RPL39P62891 AK6P2-201ENST00000549020 471 ntBASIC-1.13□□□□□ -2.59
RPL39P62891 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-1.13□□□□□ -2.59
RPL39P62891 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-1.13□□□□□ -2.59
RPL39P62891 AC073968.1-201ENST00000618594 637 ntBASIC-1.13□□□□□ -2.59
RPL39P62891 uc_338.22-201ENST00000622722 187 ntBASIC-1.13□□□□□ -2.59
RPL39P62891 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC-1.14□□□□□ -2.59
RPL39P62891 RNU6-127P-201ENST00000390897 107 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 SNORA75.2-201ENST00000391138 150 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 RPL22P22-201ENST00000395439 379 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 RPS26P42-201ENST00000413485 326 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 MTND2P5-201ENST00000432656 1006 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-1.14□□□□□ -2.59
RPL39P62891 AC008494.2-201ENST00000514544 370 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 AL356057.1-201ENST00000533798 831 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 AC124947.2-202ENST00000552735 133 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-1.14□□□□□ -2.59
RPL39P62891 BNIP3P31-201ENST00000604515 566 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 AL109620.1-201ENST00000618738 1197 ntBASIC-1.14□□□□□ -2.59
RPL39P62891 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
RPL39P62891 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
RPL39P62891 NDUFS5P4-201ENST00000412983 318 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-1.15□□□□□ -2.59
RPL39P62891 YWHAZP8-201ENST00000436935 731 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 AC104332.1-201ENST00000440471 797 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 ZNF886P-201ENST00000450781 723 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 RPS27AP8-201ENST00000452665 445 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-1.15□□□□□ -2.59
RPL39P62891 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-1.15□□□□□ -2.59
RPL39P62891 AL442163.3-201ENST00000554110 156 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 AC012213.3-201ENST00000577199 777 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 AP001981.2-201ENST00000603241 418 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 AL670379.3-201ENST00000605040 251 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 AC108676.2-201ENST00000605225 163 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 AC015726.2-201ENST00000620112 122 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 AC130454.1-201ENST00000622948 401 ntBASIC-1.15□□□□□ -2.59
RPL39P62891 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-1.16□□□□□ -2.6
RPL39P62891 SNORD49B-201ENST00000365172 72 ntBASIC-1.16□□□□□ -2.6
RPL39P62891 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-1.16□□□□□ -2.6
RPL39P62891 RNU6-140P-201ENST00000384566 108 ntBASIC-1.16□□□□□ -2.6
RPL39P62891 SNORD105-201ENST00000386910 85 ntBASIC-1.16□□□□□ -2.6
RPL39P62891 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
RPL39P62891 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-1.16□□□□□ -2.6
RPL39P62891 GXYLT1P1-201ENST00000446657 490 ntBASIC-1.16□□□□□ -2.6
RPL39P62891 AC092001.1-201ENST00000453012 261 ntBASIC-1.16□□□□□ -2.6
RPL39P62891 AC021146.8-201ENST00000507455 733 ntBASIC-1.16□□□□□ -2.6
RPL39P62891 AC010376.1-201ENST00000522101 334 ntBASIC-1.16□□□□□ -2.6
RPL39P62891 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-1.16□□□□□ -2.6
RPL39P62891 MIR3167-201ENST00000579623 85 ntBASIC-1.16□□□□□ -2.6
RPL39P62891 AC015688.2-201ENST00000584523 262 ntBASIC-1.16□□□□□ -2.6
RPL39P62891 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-1.16□□□□□ -2.6
RPL39P62891 ATM-228ENST00000639240 498 ntTSL 5 BASIC-1.16□□□□□ -2.6
RPL39P62891 MIR18A-201ENST00000362310 71 ntBASIC-1.17□□□□□ -2.6
RPL39P62891 SNORD95.1-201ENST00000364099 68 ntBASIC-1.17□□□□□ -2.6
RPL39P62891 RNU6-1226P-201ENST00000384317 107 ntBASIC-1.17□□□□□ -2.6
RPL39P62891 PCNPP3-201ENST00000393579 471 ntBASIC-1.17□□□□□ -2.6
RPL39P62891 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-1.17□□□□□ -2.6
RPL39P62891 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-1.17□□□□□ -2.6
RPL39P62891 snoU13.27-201ENST00000459278 104 ntBASIC-1.17□□□□□ -2.6
RPL39P62891 RBBP4P6-201ENST00000508098 202 ntBASIC-1.17□□□□□ -2.6
RPL39P62891 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-1.17□□□□□ -2.6
RPL39P62891 AC025465.4-201ENST00000513422 638 ntBASIC-1.17□□□□□ -2.6
RPL39P62891 AC027288.2-201ENST00000553028 243 ntBASIC-1.17□□□□□ -2.6
RPL39P62891 MIR412-201ENST00000362142 91 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 RNU6-1123P-201ENST00000362347 106 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 RNU6-1099P-201ENST00000363533 107 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 SUGT1P1-201ENST00000379514 476 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 RN7SKP142-201ENST00000411236 328 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-1.18□□□□□ -2.6
RPL39P62891 MTCYBP10-201ENST00000424905 650 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AC022364.2-201ENST00000457963 554 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AC114755.3-201ENST00000481111 251 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AC011005.2-201ENST00000487324 359 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 RNU6-758P-201ENST00000516292 89 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 SCARNA15.2-201ENST00000516409 127 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-1.18□□□□□ -2.6
RPL39P62891 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-1.18□□□□□ -2.6
RPL39P62891 AC009712.1-201ENST00000564938 316 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AC136618.2-201ENST00000575091 400 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AF038458.1-201ENST00000588406 262 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-1.18□□□□□ -2.6
RPL39P62891 CTHRC1P1-201ENST00000605383 469 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AC018926.1-201ENST00000616335 435 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 U6.48-201ENST00000618523 106 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-1.18□□□□□ -2.6
RPL39P62891 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-1.18□□□□□ -2.6
RPL39P62891 AC024940.5-201ENST00000622889 474 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AC004009.2-201ENST00000623016 728 ntBASIC-1.18□□□□□ -2.6
RPL39P62891 AC010615.1-201ENST00000594254 1764 ntBASIC-1.19□□□□□ -2.6
RPL39P62891 MTND5P32-201ENST00000560711 1802 ntBASIC-1.19□□□□□ -2.6
RPL39P62891 SNORA12.1-201ENST00000390873 148 ntBASIC-1.19□□□□□ -2.6
RPL39P62891 RPL36P19-201ENST00000430744 301 ntBASIC-1.19□□□□□ -2.6
RPL39P62891 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-1.19□□□□□ -2.6
RPL39P62891 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-1.19□□□□□ -2.6
RPL39P62891 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms