Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC025750.2-201ENST00000442609 450 ntBASIC2.54□□□□□ -2
RPS3AP61247 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.54□□□□□ -2
RPS3AP61247 AC003982.1-202ENST00000469928 248 ntBASIC2.54□□□□□ -2
RPS3AP61247 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.54□□□□□ -2
RPS3AP61247 RNU6-864P-201ENST00000516256 108 ntBASIC2.54□□□□□ -2
RPS3AP61247 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
RPS3AP61247 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.54□□□□□ -2
RPS3AP61247 AP000889.2-201ENST00000532684 490 ntBASIC2.54□□□□□ -2
RPS3AP61247 AC007375.1-201ENST00000554513 578 ntBASIC2.54□□□□□ -2
RPS3AP61247 AC023043.2-201ENST00000589678 1026 ntBASIC2.54□□□□□ -2
RPS3AP61247 BNIP3P10-201ENST00000605360 577 ntBASIC2.54□□□□□ -2
RPS3AP61247 AL136221.1-201ENST00000621449 509 ntBASIC2.54□□□□□ -2
RPS3AP61247 SNORD98-201ENST00000636377 67 ntBASIC2.54□□□□□ -2
RPS3AP61247 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPS3AP61247 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPS3AP61247 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.54□□□□□ -2
RPS3AP61247 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.53□□□□□ -2
RPS3AP61247 MIR26A1-201ENST00000362205 77 ntBASIC2.53□□□□□ -2
RPS3AP61247 snoU2_19.1-201ENST00000362361 80 ntBASIC2.53□□□□□ -2
RPS3AP61247 RNU6-562P-201ENST00000362731 107 ntBASIC2.53□□□□□ -2
RPS3AP61247 Y_RNA.86-201ENST00000363020 111 ntBASIC2.53□□□□□ -2
RPS3AP61247 SNORA80A-201ENST00000363922 136 ntBASIC2.53□□□□□ -2
RPS3AP61247 Y_RNA.212-201ENST00000364177 102 ntBASIC2.53□□□□□ -2
RPS3AP61247 RNU6-142P-201ENST00000384019 107 ntBASIC2.53□□□□□ -2
RPS3AP61247 RNU6-933P-201ENST00000384424 107 ntBASIC2.53□□□□□ -2
RPS3AP61247 RNU6-831P-201ENST00000384548 107 ntBASIC2.53□□□□□ -2
RPS3AP61247 RNU6-1148P-201ENST00000410992 104 ntBASIC2.53□□□□□ -2
RPS3AP61247 AL590556.1-201ENST00000423231 483 ntBASIC2.53□□□□□ -2
RPS3AP61247 AC105272.1-201ENST00000438604 198 ntBASIC2.53□□□□□ -2
RPS3AP61247 AL135938.1-201ENST00000443141 297 ntBASIC2.53□□□□□ -2
RPS3AP61247 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.53□□□□□ -2
RPS3AP61247 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.53□□□□□ -2
RPS3AP61247 AC107222.1-201ENST00000510899 637 ntBASIC2.53□□□□□ -2
RPS3AP61247 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
RPS3AP61247 CPDP1-201ENST00000579660 283 ntBASIC2.53□□□□□ -2
RPS3AP61247 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.53□□□□□ -2
RPS3AP61247 AL034555.1-201ENST00000604816 211 ntBASIC2.53□□□□□ -2
RPS3AP61247 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RPS3AP61247 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RPS3AP61247 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
RPS3AP61247 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RPS3AP61247 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.53□□□□□ -2
RPS3AP61247 AC092593.1-201ENST00000515413 1815 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC009541.1-201ENST00000438279 2662 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 SNORA5B-201ENST00000363786 132 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 RNU4-56P-201ENST00000364700 142 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RPS3AP61247 SNORA32.2-201ENST00000384049 122 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 HMGB3P2-201ENST00000411913 584 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AL590135.1-201ENST00000422215 156 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC019205.3-201ENST00000424573 156 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.52□□□□□ -2.01
RPS3AP61247 MTND4LP16-201ENST00000440828 295 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC092473.1-201ENST00000441098 221 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC009238.1-201ENST00000442165 424 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC009237.6-201ENST00000446969 424 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 RPS29P27-201ENST00000463711 170 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.52□□□□□ -2.01
RPS3AP61247 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.52□□□□□ -2.01
RPS3AP61247 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.52□□□□□ -2.01
RPS3AP61247 MIR3942-201ENST00000585264 109 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 ZNF861P-201ENST00000588126 639 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.52□□□□□ -2.01
RPS3AP61247 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.52□□□□□ -2.01
RPS3AP61247 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.52□□□□□ -2.01
RPS3AP61247 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.52□□□□□ -2.01
RPS3AP61247 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.52□□□□□ -2.01
RPS3AP61247 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.52□□□□□ -2.01
RPS3AP61247 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPS3AP61247 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RPS3AP61247 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RPS3AP61247 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RPS3AP61247 AC069528.2-201ENST00000624849 1991 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
RPS3AP61247 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RPS3AP61247 SNORD116-11-201ENST00000383882 92 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 SNORA18.3-201ENST00000384122 132 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 Y_RNA.504-201ENST00000384481 104 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 RNU6-95P-201ENST00000384697 107 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 RNU6-510P-201ENST00000391239 108 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 AL591034.2-201ENST00000402839 359 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.51□□□□□ -2.01
RPS3AP61247 EIF1AXP1-201ENST00000419267 435 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.51□□□□□ -2.01
RPS3AP61247 MTND3P9-201ENST00000429526 346 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 AC112220.1-201ENST00000434628 355 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.51□□□□□ -2.01
RPS3AP61247 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.51□□□□□ -2.01
RPS3AP61247 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPS3AP61247 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.51□□□□□ -2.01
RPS3AP61247 AC104564.1-201ENST00000493028 407 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.51□□□□□ -2.01
RPS3AP61247 AC091874.1-201ENST00000511402 339 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.51□□□□□ -2.01
RPS3AP61247 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.51□□□□□ -2.01
RPS3AP61247 AC018630.3-201ENST00000542637 96 ntBASIC2.51□□□□□ -2.01
RPS3AP61247 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms