Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL591806.2-201ENST00000433122 173 ntBASIC2□□□□□ -2.09
SRP54P61011 DNAJC19P4-201ENST00000440115 345 ntBASIC2□□□□□ -2.09
SRP54P61011 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2□□□□□ -2.09
SRP54P61011 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2□□□□□ -2.09
SRP54P61011 PRELID3BP1-201ENST00000457142 540 ntBASIC2□□□□□ -2.09
SRP54P61011 snoU13.23-201ENST00000458863 104 ntBASIC2□□□□□ -2.09
SRP54P61011 RPS3AP17-201ENST00000472594 777 ntBASIC2□□□□□ -2.09
SRP54P61011 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2□□□□□ -2.09
SRP54P61011 RNU5F-2P-201ENST00000516066 82 ntBASIC2□□□□□ -2.09
SRP54P61011 RNU2-44P-201ENST00000516795 194 ntBASIC2□□□□□ -2.09
SRP54P61011 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
SRP54P61011 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2□□□□□ -2.09
SRP54P61011 HIF1AP1-201ENST00000553642 175 ntBASIC2□□□□□ -2.09
SRP54P61011 OR11H5P-201ENST00000554039 926 ntBASIC2□□□□□ -2.09
SRP54P61011 AC103987.3-201ENST00000582071 292 ntBASIC2□□□□□ -2.09
SRP54P61011 AC119751.7-201ENST00000600494 245 ntBASIC2□□□□□ -2.09
SRP54P61011 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
SRP54P61011 AC018889.1-201ENST00000605372 397 ntBASIC2□□□□□ -2.09
SRP54P61011 AC004908.3-201ENST00000610248 625 ntBASIC2□□□□□ -2.09
SRP54P61011 U2.17-201ENST00000611454 95 ntBASIC2□□□□□ -2.09
SRP54P61011 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2□□□□□ -2.09
SRP54P61011 AC097520.1-201ENST00000624435 385 ntBASIC2□□□□□ -2.09
SRP54P61011 AC090582.1-201ENST00000636321 199 ntBASIC2□□□□□ -2.09
SRP54P61011 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2□□□□□ -2.09
SRP54P61011 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
SRP54P61011 ZNF355P-201ENST00000427301 3216 ntBASIC2□□□□□ -2.09
SRP54P61011 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SRP54P61011 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SRP54P61011 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SRP54P61011 AL356292.1-201ENST00000283110 373 ntBASIC1.99□□□□□ -2.09
SRP54P61011 RNA5SP432-201ENST00000362480 116 ntBASIC1.99□□□□□ -2.09
SRP54P61011 RNU6-996P-201ENST00000365438 107 ntBASIC1.99□□□□□ -2.09
SRP54P61011 Y_RNA.597-201ENST00000410463 100 ntBASIC1.99□□□□□ -2.09
SRP54P61011 CDK8P2-201ENST00000415020 547 ntBASIC1.99□□□□□ -2.09
SRP54P61011 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.99□□□□□ -2.09
SRP54P61011 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.99□□□□□ -2.09
SRP54P61011 MTCO2P19-201ENST00000427513 598 ntBASIC1.99□□□□□ -2.09
SRP54P61011 AC027124.2-201ENST00000428249 105 ntBASIC1.99□□□□□ -2.09
SRP54P61011 AC002486.1-201ENST00000435098 391 ntBASIC1.99□□□□□ -2.09
SRP54P61011 IFNA20P-201ENST00000436840 528 ntBASIC1.99□□□□□ -2.09
SRP54P61011 AL360221.1-201ENST00000445989 335 ntBASIC1.99□□□□□ -2.09
SRP54P61011 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
SRP54P61011 RPL23AP42-201ENST00000471152 471 ntBASIC1.99□□□□□ -2.09
SRP54P61011 AC116337.1-201ENST00000509680 687 ntBASIC1.99□□□□□ -2.09
SRP54P61011 DEFB122-202ENST00000569013 197 ntBASIC1.99□□□□□ -2.09
SRP54P61011 MIR4287-201ENST00000579398 78 ntBASIC1.99□□□□□ -2.09
SRP54P61011 MIR3136-201ENST00000583498 78 ntBASIC1.99□□□□□ -2.09
SRP54P61011 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
SRP54P61011 AL391646.1-201ENST00000603860 190 ntBASIC1.99□□□□□ -2.09
SRP54P61011 AL356157.2-201ENST00000605122 111 ntBASIC1.99□□□□□ -2.09
SRP54P61011 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SRP54P61011 AL359314.1-201ENST00000616913 261 ntBASIC1.99□□□□□ -2.09
SRP54P61011 AC009509.4-201ENST00000619202 509 ntBASIC1.99□□□□□ -2.09
SRP54P61011 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SRP54P61011 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.99□□□□□ -2.09
SRP54P61011 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SRP54P61011 ZNF702P-202ENST00000434269 1966 ntBASIC1.98□□□□□ -2.09
SRP54P61011 RNU6-428P-201ENST00000362942 107 ntBASIC1.98□□□□□ -2.09
SRP54P61011 Y_RNA.296-201ENST00000364930 108 ntBASIC1.98□□□□□ -2.09
SRP54P61011 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SRP54P61011 SNORD14D-201ENST00000384390 87 ntBASIC1.98□□□□□ -2.09
SRP54P61011 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SRP54P61011 Y_RNA.582-201ENST00000391023 95 ntBASIC1.98□□□□□ -2.09
SRP54P61011 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
SRP54P61011 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.98□□□□□ -2.09
SRP54P61011 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.98□□□□□ -2.09
SRP54P61011 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.98□□□□□ -2.09
SRP54P61011 AC073415.1-201ENST00000449240 153 ntBASIC1.98□□□□□ -2.09
SRP54P61011 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.98□□□□□ -2.09
SRP54P61011 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.98□□□□□ -2.09
SRP54P61011 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.98□□□□□ -2.09
SRP54P61011 RNU7-180P-201ENST00000459240 63 ntBASIC1.98□□□□□ -2.09
SRP54P61011 AL163973.1-201ENST00000484753 577 ntBASIC1.98□□□□□ -2.09
SRP54P61011 AC108078.1-201ENST00000508073 725 ntBASIC1.98□□□□□ -2.09
SRP54P61011 AC079140.3-201ENST00000511111 550 ntBASIC1.98□□□□□ -2.09
SRP54P61011 AC091133.4-201ENST00000511142 308 ntBASIC1.98□□□□□ -2.09
SRP54P61011 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.98□□□□□ -2.09
SRP54P61011 AC004223.2-201ENST00000590309 544 ntBASIC1.98□□□□□ -2.09
SRP54P61011 AL109918.3-201ENST00000603072 338 ntBASIC1.98□□□□□ -2.09
SRP54P61011 AL034555.1-201ENST00000604816 211 ntBASIC1.98□□□□□ -2.09
SRP54P61011 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SRP54P61011 AL354685.2-201ENST00000448218 1447 ntBASIC1.98□□□□□ -2.09
SRP54P61011 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.98□□□□□ -2.09
SRP54P61011 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SRP54P61011 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SRP54P61011 RNU6-43P-201ENST00000384302 107 ntBASIC1.97□□□□□ -2.09
SRP54P61011 RNU6-692P-201ENST00000384496 107 ntBASIC1.97□□□□□ -2.09
SRP54P61011 MIR764-201ENST00000390811 85 ntBASIC1.97□□□□□ -2.09
SRP54P61011 RNA5SP465-201ENST00000391195 109 ntBASIC1.97□□□□□ -2.09
SRP54P61011 MIR1262-201ENST00000408276 93 ntBASIC1.97□□□□□ -2.09
SRP54P61011 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP54P61011 MTCYBP8-201ENST00000422855 651 ntBASIC1.97□□□□□ -2.09
SRP54P61011 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
SRP54P61011 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP54P61011 MTCO2P16-201ENST00000436962 677 ntBASIC1.97□□□□□ -2.09
SRP54P61011 MTND2P29-201ENST00000438595 412 ntBASIC1.97□□□□□ -2.09
SRP54P61011 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.97□□□□□ -2.09
SRP54P61011 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP54P61011 RPL23AP3-201ENST00000453844 468 ntBASIC1.97□□□□□ -2.09
SRP54P61011 PTP4A1P4-201ENST00000512479 322 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms