Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.89□□□□□ -1.79
RTP1P59025 SCARNA4-202ENST00000625402 129 ntBASIC3.89□□□□□ -1.79
RTP1P59025 SCARNA4-201ENST00000629045 128 ntBASIC3.89□□□□□ -1.79
RTP1P59025 U6.99-201ENST00000637524 83 ntBASIC3.89□□□□□ -1.79
RTP1P59025 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTP1P59025 AC009541.1-201ENST00000438279 2662 ntBASIC3.88□□□□□ -1.79
RTP1P59025 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTP1P59025 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTP1P59025 RNU6-17P-201ENST00000384245 107 ntBASIC3.88□□□□□ -1.79
RTP1P59025 Y_RNA.464-201ENST00000384282 110 ntBASIC3.88□□□□□ -1.79
RTP1P59025 RNU6-18P-201ENST00000384527 107 ntBASIC3.88□□□□□ -1.79
RTP1P59025 AC017079.2-201ENST00000416102 485 ntBASIC3.88□□□□□ -1.79
RTP1P59025 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.88□□□□□ -1.79
RTP1P59025 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.88□□□□□ -1.79
RTP1P59025 AL590383.1-201ENST00000428602 75 ntBASIC3.88□□□□□ -1.79
RTP1P59025 AL445305.1-201ENST00000432577 575 ntBASIC3.88□□□□□ -1.79
RTP1P59025 AC009296.1-201ENST00000443146 155 ntBASIC3.88□□□□□ -1.79
RTP1P59025 Z75741.1-201ENST00000446793 314 ntBASIC3.88□□□□□ -1.79
RTP1P59025 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.88□□□□□ -1.79
RTP1P59025 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.88□□□□□ -1.79
RTP1P59025 CBX3P4-201ENST00000538909 354 ntBASIC3.88□□□□□ -1.79
RTP1P59025 CYCSP39-201ENST00000565821 309 ntBASIC3.88□□□□□ -1.79
RTP1P59025 AC241585.2-209ENST00000638217 143 ntBASIC3.88□□□□□ -1.79
RTP1P59025 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTP1P59025 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.88□□□□□ -1.79
RTP1P59025 AC068647.1-201ENST00000489539 2265 ntBASIC3.88□□□□□ -1.79
RTP1P59025 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTP1P59025 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTP1P59025 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.88□□□□□ -1.79
RTP1P59025 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RTP1P59025 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RTP1P59025 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.87□□□□□ -1.79
RTP1P59025 RNU6-545P-201ENST00000362681 104 ntBASIC3.87□□□□□ -1.79
RTP1P59025 Y_RNA.76-201ENST00000362931 109 ntBASIC3.87□□□□□ -1.79
RTP1P59025 Y_RNA.199-201ENST00000364014 102 ntBASIC3.87□□□□□ -1.79
RTP1P59025 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.87□□□□□ -1.79
RTP1P59025 RNU6-1181P-201ENST00000384191 106 ntBASIC3.87□□□□□ -1.79
RTP1P59025 RNU6-662P-201ENST00000384253 104 ntBASIC3.87□□□□□ -1.79
RTP1P59025 SNORD63-201ENST00000384262 68 ntBASIC3.87□□□□□ -1.79
RTP1P59025 Z82210.1-201ENST00000440037 231 ntBASIC3.87□□□□□ -1.79
RTP1P59025 AC009237.8-201ENST00000445492 379 ntBASIC3.87□□□□□ -1.79
RTP1P59025 HSPE1P25-201ENST00000455484 251 ntBASIC3.87□□□□□ -1.79
RTP1P59025 RPL30P1-201ENST00000488676 339 ntBASIC3.87□□□□□ -1.79
RTP1P59025 SNORA43.2-201ENST00000516652 128 ntBASIC3.87□□□□□ -1.79
RTP1P59025 RNU6-255P-201ENST00000516957 105 ntBASIC3.87□□□□□ -1.79
RTP1P59025 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.87□□□□□ -1.79
RTP1P59025 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.87□□□□□ -1.79
RTP1P59025 AC026333.2-201ENST00000542164 106 ntBASIC3.87□□□□□ -1.79
RTP1P59025 MIR3910-1-201ENST00000580936 111 ntBASIC3.87□□□□□ -1.79
RTP1P59025 RPL23AP88-201ENST00000605759 454 ntBASIC3.87□□□□□ -1.79
RTP1P59025 AC097372.5-201ENST00000623665 376 ntBASIC3.87□□□□□ -1.79
RTP1P59025 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTP1P59025 AL035425.3-201ENST00000564206 4996 ntBASIC3.87□□□□□ -1.79
RTP1P59025 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RTP1P59025 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTP1P59025 AC008568.2-201ENST00000623862 2313 ntBASIC3.87□□□□□ -1.79
RTP1P59025 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
RTP1P59025 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.86□□□□□ -1.79
RTP1P59025 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RTP1P59025 RNU6-290P-201ENST00000365212 101 ntBASIC3.86□□□□□ -1.79
RTP1P59025 Z98749.2-208ENST00000381646 500 ntBASIC3.86□□□□□ -1.79
RTP1P59025 RNU6-968P-201ENST00000384076 107 ntBASIC3.86□□□□□ -1.79
RTP1P59025 RNU6-187P-201ENST00000384139 106 ntBASIC3.86□□□□□ -1.79
RTP1P59025 RNU6-318P-201ENST00000384283 103 ntBASIC3.86□□□□□ -1.79
RTP1P59025 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RTP1P59025 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RTP1P59025 U3.37-201ENST00000408528 213 ntBASIC3.86□□□□□ -1.79
RTP1P59025 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.86□□□□□ -1.79
RTP1P59025 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RTP1P59025 AC016700.2-201ENST00000446011 156 ntBASIC3.86□□□□□ -1.79
RTP1P59025 RNU7-170P-201ENST00000459303 61 ntBASIC3.86□□□□□ -1.79
RTP1P59025 AC078918.1-201ENST00000498515 228 ntBASIC3.86□□□□□ -1.79
RTP1P59025 AC005921.1-201ENST00000510589 286 ntBASIC3.86□□□□□ -1.79
RTP1P59025 AC107393.1-201ENST00000512403 346 ntBASIC3.86□□□□□ -1.79
RTP1P59025 AP004242.1-201ENST00000533701 349 ntBASIC3.86□□□□□ -1.79
RTP1P59025 MIR4782-201ENST00000577987 79 ntBASIC3.86□□□□□ -1.79
RTP1P59025 MIR4276-201ENST00000584832 70 ntBASIC3.86□□□□□ -1.79
RTP1P59025 AC024153.1-201ENST00000603103 365 ntBASIC3.86□□□□□ -1.79
RTP1P59025 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.86□□□□□ -1.79
RTP1P59025 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.86□□□□□ -1.79
RTP1P59025 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RTP1P59025 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
RTP1P59025 Z83843.1-201ENST00000604070 3685 ntBASIC3.85□□□□□ -1.79
RTP1P59025 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.85□□□□□ -1.79
RTP1P59025 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.85□□□□□ -1.79
RTP1P59025 MIR411-201ENST00000362239 96 ntBASIC3.85□□□□□ -1.79
RTP1P59025 SNORA31-201ENST00000362607 130 ntBASIC3.85□□□□□ -1.79
RTP1P59025 RNU4-90P-201ENST00000362773 141 ntBASIC3.85□□□□□ -1.79
RTP1P59025 RNU6-527P-201ENST00000363425 104 ntBASIC3.85□□□□□ -1.79
RTP1P59025 RNA5SP189-201ENST00000364920 115 ntBASIC3.85□□□□□ -1.79
RTP1P59025 RNU6-926P-201ENST00000384075 107 ntBASIC3.85□□□□□ -1.79
RTP1P59025 AL031121.1-201ENST00000406553 254 ntBASIC3.85□□□□□ -1.79
RTP1P59025 EIF1P2-201ENST00000428233 350 ntBASIC3.85□□□□□ -1.79
RTP1P59025 AC124916.1-201ENST00000444020 547 ntBASIC3.85□□□□□ -1.79
RTP1P59025 AL353705.4-201ENST00000449661 238 ntBASIC3.85□□□□□ -1.79
RTP1P59025 RNU7-120P-201ENST00000459334 63 ntBASIC3.85□□□□□ -1.79
RTP1P59025 AC097462.2-201ENST00000504623 481 ntBASIC3.85□□□□□ -1.79
RTP1P59025 RNU6-703P-201ENST00000516946 107 ntBASIC3.85□□□□□ -1.79
RTP1P59025 RNU6-1183P-201ENST00000517054 60 ntBASIC3.85□□□□□ -1.79
RTP1P59025 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms