Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL449363.1-201ENST00000617815 186 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 SDR42E1P4-201ENST00000620894 481 ntBASIC2.14□□□□□ -2.07
RIPK4P57078 MTND5P17-201ENST00000418405 1603 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.13□□□□□ -2.07
RIPK4P57078 Y_RNA.255-201ENST00000364581 97 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 RNU6-996P-201ENST00000365438 107 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 RNU6-190P-201ENST00000384154 102 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 RNU6-748P-201ENST00000384648 107 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 RNU6-19P-201ENST00000384718 107 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 RNU6-482P-201ENST00000391068 107 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RIPK4P57078 OR9R1P-201ENST00000412200 877 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 PTGES3P4-201ENST00000426243 356 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.13□□□□□ -2.07
RIPK4P57078 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.13□□□□□ -2.07
RIPK4P57078 MTATP6P23-201ENST00000440153 476 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 MTND1P18-201ENST00000448191 573 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.13□□□□□ -2.07
RIPK4P57078 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.13□□□□□ -2.07
RIPK4P57078 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.13□□□□□ -2.07
RIPK4P57078 GMFBP1-201ENST00000467831 427 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 AL163973.1-201ENST00000484753 577 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.13□□□□□ -2.07
RIPK4P57078 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RIPK4P57078 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.13□□□□□ -2.07
RIPK4P57078 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.13□□□□□ -2.07
RIPK4P57078 RNU6-123P-201ENST00000516163 102 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 RNU6-572P-201ENST00000516724 80 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 SNORA31.19-201ENST00000517079 126 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.13□□□□□ -2.07
RIPK4P57078 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.13□□□□□ -2.07
RIPK4P57078 AC109635.3-201ENST00000529536 185 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 LINC00933-203ENST00000559812 219 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 MIR4782-201ENST00000577987 79 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 SNORA59B-202ENST00000578183 701 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 AL096840.1-201ENST00000603287 93 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 AC104458.1-201ENST00000608243 463 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 AC024581.2-201ENST00000619986 252 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.13□□□□□ -2.07
RIPK4P57078 AC024940.5-201ENST00000622889 474 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 FER-210ENST00000628534 558 ntTSL 5 BASIC2.13□□□□□ -2.07
RIPK4P57078 U6.99-201ENST00000637524 83 ntBASIC2.13□□□□□ -2.07
RIPK4P57078 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
RIPK4P57078 AC103710.2-202ENST00000641454 2853 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 RNU6-552P-201ENST00000362869 119 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 Y_RNA.88-201ENST00000363029 99 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 RNU6-179P-201ENST00000363350 107 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 RNY3P3-201ENST00000363816 102 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 RNA5SP363-201ENST00000365072 115 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 RNU4-20P-201ENST00000365601 151 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 Y_RNA.481-201ENST00000384373 102 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.12□□□□□ -2.07
RIPK4P57078 AC022364.2-201ENST00000457963 554 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 RNU7-182P-201ENST00000459009 62 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 RNU7-63P-201ENST00000459054 62 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 AC104806.1-201ENST00000508720 308 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 AC023141.11-201ENST00000508864 202 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 AC105417.1-201ENST00000514691 285 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.12□□□□□ -2.07
RIPK4P57078 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.12□□□□□ -2.07
RIPK4P57078 MIR4703-201ENST00000577728 79 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 AL162413.1-201ENST00000603198 110 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 AP001486.3-201ENST00000615334 372 ntBASIC2.12□□□□□ -2.07
RIPK4P57078 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RIPK4P57078 AL359854.1-201ENST00000614203 1594 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 Y_RNA.33-201ENST00000362591 102 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 RNU6-457P-201ENST00000363999 107 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 RNU6-395P-201ENST00000365662 106 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 RNU6-166P-201ENST00000384371 107 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 U6atac.2-201ENST00000408644 118 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 RNU6-1025P-201ENST00000410629 104 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 RNU6-1148P-201ENST00000410992 104 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.11□□□□□ -2.07
RIPK4P57078 RPL31P63-201ENST00000422565 375 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AC004383.1-201ENST00000438135 289 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AL078601.1-201ENST00000444542 271 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 MTND4P18-201ENST00000447010 465 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AC104058.1-201ENST00000448028 297 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.11□□□□□ -2.07
RIPK4P57078 AC092001.1-201ENST00000453012 261 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 HMGB3P17-201ENST00000504195 649 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 CCDC34P1-201ENST00000507441 517 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 RNU6-237P-201ENST00000515985 71 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 RNU6-581P-201ENST00000516214 105 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 RNU6-685P-201ENST00000517088 95 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AC010186.2-204ENST00000537668 439 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AL118558.2-201ENST00000556294 238 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 MIR4424-201ENST00000585257 86 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AC010525.2-201ENST00000590920 195 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AC012409.4-201ENST00000612923 249 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AL359547.2-201ENST00000615810 418 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AL162373.1-201ENST00000620433 407 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AC138627.2-201ENST00000624202 601 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.11□□□□□ -2.07
RIPK4P57078 MIR3662-201ENST00000637030 95 ntBASIC2.11□□□□□ -2.07
RIPK4P57078 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
RIPK4P57078 RNU6-38P-201ENST00000384085 107 ntBASIC2.1□□□□□ -2.07
RIPK4P57078 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RIPK4P57078 RNU6-550P-201ENST00000391057 101 ntBASIC2.1□□□□□ -2.07
RIPK4P57078 CISD1P1-201ENST00000393907 327 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms