Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RNU6-527P-201ENST00000363425 104 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 RNU6-438P-201ENST00000365561 103 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 MIR194-1-201ENST00000384892 85 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 SNORD115.1-201ENST00000391109 76 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 RPL23AP32-201ENST00000395315 459 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 AP1B1P2-201ENST00000416196 106 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 ARL5AP1-201ENST00000418991 388 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 ATP5J2P3-201ENST00000451550 258 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.89□□□□□ -2.27
CLDN12P56749 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.89□□□□□ -2.27
CLDN12P56749 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.89□□□□□ -2.27
CLDN12P56749 AL133373.1-201ENST00000497098 94 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.89□□□□□ -2.27
CLDN12P56749 AC108078.2-201ENST00000510750 236 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 RNU1-86P-201ENST00000516108 154 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 RNU6-123P-201ENST00000516163 102 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 RNU1-107P-201ENST00000516617 154 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.89□□□□□ -2.27
CLDN12P56749 AL512310.8-201ENST00000550183 120 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.89□□□□□ -2.27
CLDN12P56749 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.89□□□□□ -2.27
CLDN12P56749 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.89□□□□□ -2.27
CLDN12P56749 AC008752.3-201ENST00000588113 712 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 AL157834.3-201ENST00000615543 103 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.89□□□□□ -2.27
CLDN12P56749 AC095038.3-201ENST00000634439 195 ntBASIC0.89□□□□□ -2.27
CLDN12P56749 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.89□□□□□ -2.27
CLDN12P56749 RNU4-56P-201ENST00000364700 142 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 RNU6-387P-201ENST00000411331 105 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.88□□□□□ -2.27
CLDN12P56749 MTCO3P29-201ENST00000432119 779 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 DYNLT3P2-201ENST00000442517 295 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.88□□□□□ -2.27
CLDN12P56749 UBL5P1-201ENST00000507979 193 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 MIR449C-201ENST00000516047 92 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 RNA5SP458-201ENST00000516188 119 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.88□□□□□ -2.27
CLDN12P56749 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.88□□□□□ -2.27
CLDN12P56749 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.88□□□□□ -2.27
CLDN12P56749 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.88□□□□□ -2.27
CLDN12P56749 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.88□□□□□ -2.27
CLDN12P56749 AP001004.1-201ENST00000582468 324 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 AL353770.2-201ENST00000620024 78 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 AP002782.1-201ENST00000623107 614 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.88□□□□□ -2.27
CLDN12P56749 SNORD98-201ENST00000636377 67 ntBASIC0.88□□□□□ -2.27
CLDN12P56749 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
CLDN12P56749 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CLDN12P56749 RNU6-1141P-201ENST00000364520 107 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 SNORA32.2-201ENST00000384049 122 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 MIR548B-201ENST00000385247 97 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 EEF1A1P40-201ENST00000412883 573 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 RPL23AP36-201ENST00000413895 458 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 AC099677.2-201ENST00000436385 175 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 RPL22P17-201ENST00000438729 315 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 ART2BP-201ENST00000453501 499 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.87□□□□□ -2.27
CLDN12P56749 AC114982.1-201ENST00000469402 321 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.87□□□□□ -2.27
CLDN12P56749 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.87□□□□□ -2.27
CLDN12P56749 AL391646.1-201ENST00000603860 190 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 AL356157.2-201ENST00000605122 111 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 AC027335.2-201ENST00000624030 375 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 AC009033.1-201ENST00000624279 431 ntBASIC0.87□□□□□ -2.27
CLDN12P56749 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.87□□□□□ -2.27
CLDN12P56749 RNU6-105P-201ENST00000363909 104 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 SNORD31B-201ENST00000364977 69 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 SNORA12-201ENST00000391162 147 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 FGF7P8-201ENST00000402994 292 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.86□□□□□ -2.27
CLDN12P56749 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.86□□□□□ -2.27
CLDN12P56749 RPL21P90-201ENST00000415692 466 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 MED13P1-201ENST00000428342 171 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 RPL37P21-201ENST00000435890 276 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 SNRPEP8-201ENST00000442866 260 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 AC007395.1-201ENST00000451333 677 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.86□□□□□ -2.27
CLDN12P56749 snoU13.27-201ENST00000459278 104 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 RNA5SP337-201ENST00000517007 109 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.86□□□□□ -2.27
CLDN12P56749 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.86□□□□□ -2.27
CLDN12P56749 MIR3124-201ENST00000582636 67 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 BNIP3P8-201ENST00000597863 560 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 MZT1P2-201ENST00000604387 248 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 AC013244.3-201ENST00000605614 388 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.86□□□□□ -2.27
CLDN12P56749 AP000484.1-201ENST00000620067 1252 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 Z69720.2-201ENST00000624755 279 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.86□□□□□ -2.27
CLDN12P56749 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.86□□□□□ -2.27
CLDN12P56749 AL159152.1-201ENST00000635019 2587 ntBASIC0.86□□□□□ -2.27
CLDN12P56749 MTND4P16-201ENST00000466108 1367 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 Y_RNA.302-201ENST00000364997 102 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CLDN12P56749 RNU6-757P-201ENST00000410334 100 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 RNU6-607P-201ENST00000411283 108 ntBASIC0.85□□□□□ -2.27
CLDN12P56749 AC004965.1-201ENST00000413033 213 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms